Variant report

Variant	rs16843222
Chromosome Location	chr2:210474021-210474022
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16843209	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs16843257	1.00[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16843292	1.00[AMR][1000 genomes]
rs59175910	1.00[AMR][1000 genomes]
rs59335890	1.00[AMR][1000 genomes]
rs59417586	0.87[AFR][1000 genomes]
rs6745316	1.00[YRI][hapmap];1.00[AMR][1000 genomes]
rs6745900	1.00[YRI][hapmap];0.94[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73071056	1.00[AMR][1000 genomes]
rs73071057	1.00[AMR][1000 genomes]
rs73071074	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072859	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072863	0.84[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072867	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072876	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73074705	1.00[AMR][1000 genomes]
rs73074707	1.00[AMR][1000 genomes]
rs7576723	0.92[YRI][hapmap];0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7576860	1.00[YRI][hapmap];0.81[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:13 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210460600-210477400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell
2	chr2:210465400-210475200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
3	chr2:210465800-210475000	Weak transcription	HUES64 Cell Line	embryonic stem cell
4	chr2:210465800-210477200	Weak transcription	HUES48 Cell Line	embryonic stem cell
5	chr2:210465800-210477800	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr2:210466400-210476400	Weak transcription	iPS-18 Cell Line	embryonic stem cell
7	chr2:210467800-210476400	Weak transcription	Fetal Brain Female	brain
8	chr2:210469000-210474800	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
9	chr2:210469200-210474400	Weak transcription	Cortex derived primary cultured neurospheres	brain
10	chr2:210469800-210478600	Weak transcription	Brain Germinal Matrix	brain
11	chr2:210473600-210474400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
12	chr2:210473800-210474800	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
13	chr2:210474000-210481400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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