Variant report

Variant	rs73071074
Chromosome Location	chr2:210481662-210481663
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16843209	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16843222	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16843257	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16843292	1.00[AMR][1000 genomes]
rs59175910	1.00[AMR][1000 genomes]
rs59335890	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59417586	1.00[AFR][1000 genomes]
rs6745316	0.89[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs6745900	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73071056	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73071057	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072859	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072863	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072867	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072876	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73074705	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73074707	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7576723	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7576860	0.93[AFR][1000 genomes];1.00[AMR][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210476600-210493600	Weak transcription	Aorta	Aorta
2	chr2:210479200-210484600	Weak transcription	Fetal Brain Male	brain
3	chr2:210480000-210493200	Weak transcription	Brain Germinal Matrix	brain
4	chr2:210480400-210481800	ZNF genes & repeats	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
5	chr2:210480400-210482000	ZNF genes & repeats	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
6	chr2:210480600-210482200	Enhancers	Placenta	Placenta
7	chr2:210481000-210482000	Weak transcription	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
8	chr2:210481000-210484400	Weak transcription	Cortex derived primary cultured neurospheres	brain
9	chr2:210481000-210486400	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
10	chr2:210481000-210493400	Weak transcription	Pancreas	Pancrea
11	chr2:210481000-210500400	Weak transcription	Foreskin Keratinocyte Primary Cells skin02	Skin
12	chr2:210481200-210484200	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
13	chr2:210481400-210493600	Strong transcription	H9 Derived Neuron Cultured Cells	ES cell derived
14	chr2:210481600-210481800	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
15	chr2:210481600-210482400	Enhancers	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
16	chr2:210481600-210484600	Weak transcription	iPS-20b Cell Line	embryonic stem cell
17	chr2:210481600-210487800	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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