Variant report

Variant	rs73071057
Chromosome Location	chr2:210456970-210456971
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:19)

rs_ID	r²[population]
rs16843209	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16843222	1.00[AMR][1000 genomes]
rs16843257	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs16843292	1.00[AMR][1000 genomes]
rs59175910	1.00[AMR][1000 genomes]
rs59335890	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs59417586	0.86[AFR][1000 genomes]
rs6745316	1.00[AMR][1000 genomes]
rs6745900	1.00[AMR][1000 genomes]
rs73071056	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73071074	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072859	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072863	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072867	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73072876	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73074705	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs73074707	0.83[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7576723	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes]
rs7576860	1.00[AMR][1000 genomes]

No data

Chromatin state (count:16 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr2:210443600-210461000	Weak transcription	H1 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr2:210446600-210461600	Weak transcription	Brain Angular Gyrus	brain
3	chr2:210447800-210460400	Weak transcription	Brain Inferior Temporal Lobe	brain
4	chr2:210455800-210457400	Genic enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
5	chr2:210456000-210457000	Enhancers	Fetal Brain Female	brain
6	chr2:210456000-210457200	Genic enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
7	chr2:210456400-210457400	Enhancers	Cortex derived primary cultured neurospheres	brain
8	chr2:210456400-210464400	Weak transcription	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
9	chr2:210456800-210457000	Enhancers	ES-I3 Cell Line	embryonic stem cell
10	chr2:210456800-210457200	Enhancers	Brain Anterior Caudate	brain
11	chr2:210456800-210457200	Enhancers	Brain Cingulate Gyrus	brain
12	chr2:210456800-210457200	Enhancers	Brain Substantia Nigra	brain
13	chr2:210456800-210457200	Enhancers	Pancreatic Islets	Pancreatic Islet
14	chr2:210456800-210457400	Enhancers	Brain Germinal Matrix	brain
15	chr2:210456800-210458200	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
16	chr2:210456800-210458800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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