The 2.0 version of rSNPBase

Variant report

Variant rs16844031
Chromosome Location chr3:101284117-101284118
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:125 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101281400-101292600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
2 chr3:101281800-101292000 Weak transcription Colonic Mucosa Colon
3 chr3:101281800-101292200 Weak transcription ES-WA7 Cell Line embryonic stem cell
4 chr3:101281800-101292200 Weak transcription Esophagus oesophagus
5 chr3:101281800-101292200 Weak transcription Placenta Amnion Placenta Amnion
6 chr3:101282000-101284200 Weak transcription Brain Anterior Caudate brain
7 chr3:101282000-101284200 Weak transcription Fetal Stomach stomach
8 chr3:101282000-101284400 Weak transcription Brain Angular Gyrus brain
9 chr3:101282000-101284400 Weak transcription Fetal Kidney kidney
10 chr3:101282000-101284600 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr3:101282000-101284600 Weak transcription HSMMtube muscle
12 chr3:101282000-101285000 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
13 chr3:101282000-101285200 Weak transcription Brain Inferior Temporal Lobe brain
14 chr3:101282000-101291800 Weak transcription Brain Substantia Nigra brain
15 chr3:101282000-101291800 Weak transcription Pancreatic Islets Pancreatic Islet
16 chr3:101282000-101292200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
17 chr3:101282000-101292200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
18 chr3:101282000-101292200 Weak transcription Right Atrium heart
19 chr3:101282200-101285000 Weak transcription Stomach Smooth Muscle stomach
20 chr3:101282200-101291600 Weak transcription Fetal Lung lung
21 chr3:101282200-101292200 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
22 chr3:101282200-101292600 Weak transcription Aorta Aorta
23 chr3:101282400-101284200 Weak transcription Left Ventricle heart
24 chr3:101282400-101284200 Weak transcription Rectal Mucosa Donor 31 rectum
25 chr3:101282400-101284400 Weak transcription Brain Germinal Matrix brain
26 chr3:101282400-101284400 Weak transcription Fetal Brain Male brain
27 chr3:101282400-101286400 Strong transcription A549 lung
28 chr3:101282400-101286600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
29 chr3:101282400-101287400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
30 chr3:101282400-101289800 Weak transcription Psoas Muscle Psoas
31 chr3:101282400-101291800 Weak transcription Brain Cingulate Gyrus brain
32 chr3:101282400-101292000 Weak transcription Right Ventricle heart
33 chr3:101282400-101292200 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
34 chr3:101282400-101292400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
35 chr3:101282400-101292600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
36 chr3:101282400-101292600 Weak transcription Spleen Spleen
37 chr3:101282600-101286600 Strong transcription iPS-18 Cell Line embryonic stem cell
38 chr3:101282600-101292000 Weak transcription Brain Hippocampus Middle brain
39 chr3:101282600-101292200 Weak transcription Small Intestine intestine
40 chr3:101282800-101285400 Strong transcription NH-A brain
41 chr3:101282800-101285600 Strong transcription ES-I3 Cell Line embryonic stem cell
42 chr3:101282800-101285600 Strong transcription H9 Cell Line embryonic stem cell
43 chr3:101282800-101286600 Strong transcription HUES6 Cell Line embryonic stem cell
44 chr3:101282800-101287200 Strong transcription Fetal Thymus thymus
45 chr3:101282800-101289600 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr3:101282800-101291400 Weak transcription Fetal Heart heart
47 chr3:101283000-101284200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr3:101283000-101284200 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
49 chr3:101283000-101284200 Weak transcription Primary T killer memory cells from peripheral blood blood
50 chr3:101283000-101284200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015