Variant report

Variant	rs7611807
Chromosome Location	chr3:101347320-101347321
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 43 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:42)

rs_ID	r²[population]
rs13317356	1.00[AMR][1000 genomes]
rs13317716	1.00[AMR][1000 genomes]
rs13433837	1.00[AMR][1000 genomes]
rs16843985	1.00[AMR][1000 genomes]
rs16844031	1.00[AMR][1000 genomes]
rs28812605	1.00[AMR][1000 genomes]
rs58060577	1.00[EUR][1000 genomes]
rs58189156	1.00[EUR][1000 genomes]
rs58823770	1.00[EUR][1000 genomes]
rs59790563	1.00[EUR][1000 genomes]
rs60574960	1.00[EUR][1000 genomes]
rs61050107	1.00[EUR][1000 genomes]
rs6776266	1.00[AMR][1000 genomes]
rs6790519	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6792530	1.00[AMR][1000 genomes]
rs6795215	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6798263	1.00[AMR][1000 genomes]
rs72948055	1.00[EUR][1000 genomes]
rs72948070	1.00[EUR][1000 genomes]
rs73863128	1.00[EUR][1000 genomes]
rs73863338	1.00[EUR][1000 genomes]
rs73863341	1.00[EUR][1000 genomes]
rs73863355	1.00[EUR][1000 genomes]
rs73863358	1.00[EUR][1000 genomes]
rs7610644	1.00[AMR][1000 genomes]
rs7611997	0.82[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs7614614	1.00[AMR][1000 genomes]
rs7619403	1.00[AMR][1000 genomes]
rs7624043	1.00[AMR][1000 genomes]
rs7624112	1.00[AMR][1000 genomes]
rs7625007	1.00[AMR][1000 genomes]
rs7631731	1.00[AMR][1000 genomes]
rs7642697	1.00[AMR][1000 genomes]
rs7644274	1.00[EUR][1000 genomes]
rs7647699	1.00[AMR][1000 genomes]
rs7648014	1.00[AMR][1000 genomes]
rs7648183	1.00[EUR][1000 genomes]
rs7648758	1.00[AMR][1000 genomes]
rs9290460	1.00[AMR][1000 genomes]
rs9840325	1.00[EUR][1000 genomes]
rs9841608	1.00[AMR][1000 genomes]
rs9872125	1.00[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv497784	chr3:101315009-102092989	Enhancers Weak transcription Flanking Active TSS Strong transcription Active TSS Transcr. at gene 5' and 3' Genic enhancers ZNF genes & repeats Bivalent Enhancer Bivalent/Poised TSS Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	87 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101344000-101348800	Weak transcription	iPS DF 19.11 Cell Line	embryonic stem cell
2	chr3:101346200-101347600	Enhancers	K562	blood

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