Variant report

Variant	rs72948055
Chromosome Location	chr3:101278346-101278347
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type
1	chr3:101277954..101280498-chr3:101281065..101283887,2	MCF-7	breast:
2	chr3:101235226..101237848-chr3:101277796..101281104,3	MCF-7	breast:
3	chr3:101251684..101253784-chr3:101277583..101280668,3	K562	blood:

Variant related genes	Relation type
ENSG00000175841	Chromatin interaction

rs_ID	r²[population]
rs56757596	1.00[AMR][1000 genomes]
rs56871732	1.00[AMR][1000 genomes]
rs57288874	1.00[AMR][1000 genomes]
rs57768297	1.00[AMR][1000 genomes]
rs58060577	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58189156	1.00[EUR][1000 genomes]
rs58823770	1.00[EUR][1000 genomes]
rs59092914	1.00[AMR][1000 genomes]
rs59212280	1.00[AMR][1000 genomes]
rs59610252	1.00[AMR][1000 genomes]
rs59761426	1.00[AMR][1000 genomes]
rs59790563	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs60451587	1.00[AMR][1000 genomes]
rs60491518	1.00[AMR][1000 genomes]
rs60574960	1.00[EUR][1000 genomes]
rs61050107	1.00[EUR][1000 genomes]
rs61302621	1.00[AMR][1000 genomes]
rs61468230	1.00[AMR][1000 genomes]
rs61473551	1.00[AMR][1000 genomes]
rs6790519	1.00[EUR][1000 genomes]
rs6795215	1.00[EUR][1000 genomes]
rs72931705	1.00[AMR][1000 genomes]
rs72931709	1.00[AMR][1000 genomes]
rs72931710	1.00[AMR][1000 genomes]
rs72931711	1.00[AMR][1000 genomes]
rs72931715	1.00[AMR][1000 genomes]
rs72931719	1.00[AMR][1000 genomes]
rs72931774	1.00[AMR][1000 genomes]
rs72931789	1.00[AMR][1000 genomes]
rs72933808	1.00[AMR][1000 genomes]
rs72933810	1.00[AMR][1000 genomes]
rs72933821	1.00[AMR][1000 genomes]
rs72933838	1.00[AMR][1000 genomes]
rs72935816	1.00[AMR][1000 genomes]
rs72935835	1.00[AMR][1000 genomes]
rs72935839	1.00[AMR][1000 genomes]
rs72935846	1.00[AMR][1000 genomes]
rs72935852	1.00[AMR][1000 genomes]
rs72935865	1.00[AMR][1000 genomes]
rs72935871	1.00[AMR][1000 genomes]
rs72935875	1.00[AMR][1000 genomes]
rs72935894	1.00[AMR][1000 genomes]
rs72937635	1.00[AMR][1000 genomes]
rs72937638	1.00[AMR][1000 genomes]
rs72937639	1.00[AMR][1000 genomes]
rs72937642	1.00[AMR][1000 genomes]
rs72937646	1.00[AMR][1000 genomes]
rs72937653	1.00[AMR][1000 genomes]
rs72937810	1.00[AMR][1000 genomes]
rs72937817	1.00[AMR][1000 genomes]
rs72938074	1.00[AMR][1000 genomes]
rs72938092	1.00[AMR][1000 genomes]
rs72940339	1.00[AMR][1000 genomes]
rs72940344	1.00[AMR][1000 genomes]
rs72940361	1.00[AMR][1000 genomes]
rs72940364	1.00[AMR][1000 genomes]
rs72940372	1.00[AMR][1000 genomes]
rs72940374	1.00[AMR][1000 genomes]
rs72940386	1.00[AMR][1000 genomes]
rs72942217	1.00[AMR][1000 genomes]
rs72942240	1.00[AMR][1000 genomes]
rs72942243	1.00[AMR][1000 genomes]
rs72942266	1.00[AMR][1000 genomes]
rs72942288	1.00[AMR][1000 genomes]
rs72944104	1.00[AMR][1000 genomes]
rs72944109	1.00[AMR][1000 genomes]
rs72944117	1.00[AMR][1000 genomes]
rs72946006	1.00[AMR][1000 genomes]
rs72946019	1.00[AMR][1000 genomes]
rs72946027	1.00[AMR][1000 genomes]
rs72946028	1.00[AMR][1000 genomes]
rs72948009	1.00[AMR][1000 genomes]
rs72948019	1.00[AMR][1000 genomes]
rs72948050	1.00[AMR][1000 genomes]
rs72948052	1.00[AMR][1000 genomes]
rs72948056	1.00[AMR][1000 genomes]
rs72948070	0.97[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73863128	1.00[EUR][1000 genomes]
rs73863338	1.00[EUR][1000 genomes]
rs73863341	1.00[EUR][1000 genomes]
rs73863355	1.00[EUR][1000 genomes]
rs73863358	1.00[EUR][1000 genomes]
rs7611807	1.00[EUR][1000 genomes]
rs7611997	1.00[EUR][1000 genomes]
rs7644274	1.00[EUR][1000 genomes]
rs7648183	1.00[EUR][1000 genomes]
rs9840325	1.00[EUR][1000 genomes]

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr3:101274600-101280400	Weak transcription	iPS DF 6.9 Cell Line	embryonic stem cell
2	chr3:101276000-101280000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
3	chr3:101276600-101280400	Weak transcription	Foreskin Melanocyte Primary Cells skin01	Skin
4	chr3:101276800-101278600	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
5	chr3:101277000-101279600	Weak transcription	HepG2	liver
6	chr3:101277600-101279800	Weak transcription	K562	blood

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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