The 2.0 version of rSNPBase

Variant report

Variant rs72933808
Chromosome Location chr3:101355090-101355091
allele A/T
Outlinks Ensembl   UCSC
Chromatin state (count:45 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101350600-101366800 Weak transcription Fetal Brain Female brain
2 chr3:101353200-101355200 Enhancers iPS-15b Cell Line embryonic stem cell
3 chr3:101353600-101355200 Enhancers ES-I3 Cell Line embryonic stem cell
4 chr3:101353600-101355200 Enhancers HUES48 Cell Line embryonic stem cell
5 chr3:101354000-101356400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr3:101354000-101356800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
7 chr3:101354200-101355400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
8 chr3:101354200-101355600 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr3:101354200-101356600 Active TSS K562 blood
10 chr3:101354200-101357000 Weak transcription HUES64 Cell Line embryonic stem cell
11 chr3:101354400-101355200 Enhancers Cortex derived primary cultured neurospheres brain
12 chr3:101354600-101355200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
13 chr3:101354600-101355200 Bivalent/Poised TSS HepG2 liver
14 chr3:101354800-101355200 Enhancers iPS-20b Cell Line embryonic stem cell
15 chr3:101354800-101355200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
16 chr3:101354800-101355200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
17 chr3:101354800-101355200 Enhancers Fetal Thymus thymus
18 chr3:101354800-101355200 Enhancers Right Atrium heart
19 chr3:101354800-101355400 Active TSS NHLF lung
20 chr3:101354800-101355600 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr3:101354800-101355600 Enhancers HUES6 Cell Line embryonic stem cell
22 chr3:101354800-101355600 Bivalent Enhancer IMR90 fetal lung fibroblasts Cell Line lung
23 chr3:101354800-101355600 Enhancers Primary B cells from peripheral blood blood
24 chr3:101354800-101355600 Enhancers Primary Natural Killer cells fromperipheralblood blood
25 chr3:101354800-101355600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin01 Skin
26 chr3:101354800-101355600 Bivalent Enhancer Foreskin Fibroblast Primary Cells skin02 Skin
27 chr3:101354800-101355600 Enhancers GM12878-XiMat blood
28 chr3:101354800-101356400 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr3:101354800-101366800 Weak transcription Fetal Muscle Leg muscle
30 chr3:101355000-101355200 Enhancers H9 Cell Line embryonic stem cell
31 chr3:101355000-101355200 Flanking Active TSS Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
32 chr3:101355000-101355200 Enhancers Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
33 chr3:101355000-101355200 Enhancers Brain Inferior Temporal Lobe brain
34 chr3:101355000-101355200 Enhancers Hela-S3 cervix
35 chr3:101355000-101355200 Active TSS Osteobl bone
36 chr3:101355000-101355400 Enhancers Primary T helper 17 cells PMA-I stimulated --
37 chr3:101355000-101355400 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
38 chr3:101355000-101355600 Enhancers Primary T cells fromperipheralblood blood
39 chr3:101355000-101355600 Enhancers Primary T helper memory cells from peripheral blood 1 blood
40 chr3:101355000-101355600 Enhancers Ganglion Eminence derived primary cultured neurospheres brain
41 chr3:101355000-101355600 Enhancers Adipose Nuclei Adipose
42 chr3:101355000-101355600 Enhancers A549 lung
43 chr3:101355000-101355600 Enhancers Dnd41 blood
44 chr3:101355000-101356800 Weak transcription H1 Cell Line embryonic stem cell
45 chr3:101355000-101366800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived

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Last update: Aug 31, 2015