The 2.0 version of rSNPBase

Variant report

Variant rs59790563
Chromosome Location chr3:101282397-101282398
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:126 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101280200-101282400 Active TSS HUES64 Cell Line embryonic stem cell
2 chr3:101280400-101282400 Active TSS Foreskin Melanocyte Primary Cells skin01 Skin
3 chr3:101280400-101282600 Active TSS Foreskin Fibroblast Primary Cells skin01 Skin
4 chr3:101280400-101282800 Active TSS hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
5 chr3:101281200-101282400 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
6 chr3:101281400-101282400 Enhancers Spleen Spleen
7 chr3:101281400-101282600 Enhancers Small Intestine intestine
8 chr3:101281400-101292600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
9 chr3:101281600-101282400 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
10 chr3:101281600-101282400 Transcr. at gene 5' and 3' iPS-18 Cell Line embryonic stem cell
11 chr3:101281600-101282400 Flanking Active TSS Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
12 chr3:101281600-101282400 Flanking Active TSS Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
13 chr3:101281600-101282400 Enhancers Primary Natural Killer cells fromperipheralblood blood
14 chr3:101281600-101282400 Transcr. at gene 5' and 3' Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr3:101281600-101282400 Enhancers Pancreas Pancrea
16 chr3:101281600-101282400 Enhancers Sigmoid Colon Sigmoid Colon
17 chr3:101281600-101282400 Flanking Active TSS HUVEC blood vessel
18 chr3:101281600-101282600 Flanking Active TSS Primary T helper cells PMA-I stimulated --
19 chr3:101281600-101282600 Transcr. at gene 5' and 3' Dnd41 blood
20 chr3:101281600-101282600 Flanking Active TSS Hela-S3 cervix
21 chr3:101281600-101283000 Transcr. at gene 5' and 3' K562 blood
22 chr3:101281800-101282400 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
23 chr3:101281800-101282400 Transcr. at gene 5' and 3' H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr3:101281800-101282400 Enhancers Primary B cells from peripheral blood blood
25 chr3:101281800-101282400 Flanking Active TSS Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr3:101281800-101282400 Enhancers Fetal Thymus thymus
27 chr3:101281800-101282400 Enhancers Left Ventricle heart
28 chr3:101281800-101282400 Enhancers Lung lung
29 chr3:101281800-101282400 Enhancers Ovary ovary
30 chr3:101281800-101282400 Transcr. at gene 5' and 3' A549 lung
31 chr3:101281800-101282600 Enhancers Primary monocytes fromperipheralblood blood
32 chr3:101281800-101282600 Enhancers Primary T cells fromperipheralblood blood
33 chr3:101281800-101282600 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
34 chr3:101281800-101282600 Enhancers Cortex derived primary cultured neurospheres brain
35 chr3:101281800-101282600 Enhancers Brain Hippocampus Middle brain
36 chr3:101281800-101282600 Enhancers Fetal Adrenal Gland Adrenal Gland
37 chr3:101281800-101282800 Enhancers Primary T helper memory cells from peripheral blood 1 blood
38 chr3:101281800-101283000 Enhancers Gastric stomach
39 chr3:101281800-101283000 Enhancers Thymus Thymus
40 chr3:101281800-101292000 Weak transcription Colonic Mucosa Colon
41 chr3:101281800-101292200 Weak transcription ES-WA7 Cell Line embryonic stem cell
42 chr3:101281800-101292200 Weak transcription Esophagus oesophagus
43 chr3:101281800-101292200 Weak transcription Placenta Amnion Placenta Amnion
44 chr3:101282000-101282400 Genic enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr3:101282000-101282400 Enhancers IMR90 fetal lung fibroblasts Cell Line lung
46 chr3:101282000-101282400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
47 chr3:101282000-101282400 Enhancers Breast Myoepithelial Primary Cells Breast
48 chr3:101282000-101282400 Enhancers Primary B cells from cord blood blood
49 chr3:101282000-101282400 Enhancers Adipose Nuclei Adipose
50 chr3:101282000-101282400 Enhancers Brain Cingulate Gyrus brain

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015