The 2.0 version of rSNPBase

Variant report

Variant rs72940386
Chromosome Location chr3:101111741-101111742
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:42 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:101085600-101137600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr3:101099000-101114600 Weak transcription K562 blood
3 chr3:101106600-101114600 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr3:101106800-101112200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
5 chr3:101106800-101133000 Weak transcription Left Ventricle heart
6 chr3:101106800-101133000 Weak transcription Pancreas Pancrea
7 chr3:101106800-101133000 Weak transcription Spleen Spleen
8 chr3:101107000-101114000 Weak transcription Fetal Thymus thymus
9 chr3:101107000-101118600 Weak transcription Primary T killer naive cells fromperipheralblood blood
10 chr3:101107000-101140800 Weak transcription Esophagus oesophagus
11 chr3:101107200-101133000 Weak transcription Gastric stomach
12 chr3:101107200-101133000 Weak transcription Thymus Thymus
13 chr3:101107200-101161200 Weak transcription Aorta Aorta
14 chr3:101108200-101112600 Weak transcription Ovary ovary
15 chr3:101108600-101112600 Weak transcription Primary T cells fromperipheralblood blood
16 chr3:101108600-101113600 Weak transcription Primary T regulatory cells fromperipheralblood blood
17 chr3:101108600-101114600 Weak transcription Primary T helper naive cells fromperipheralblood blood
18 chr3:101108600-101114600 Weak transcription Monocytes-CD14+_RO01746 blood
19 chr3:101108600-101116400 Weak transcription Primary hematopoietic stem cells short term culture blood
20 chr3:101108600-101119400 Weak transcription Primary mononuclear cells fromperipheralblood Blood
21 chr3:101108600-101138000 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr3:101108800-101113000 Weak transcription Primary T helper cells fromperipheralblood blood
23 chr3:101109400-101133600 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr3:101109800-101127000 Weak transcription Primary T killer memory cells from peripheral blood blood
25 chr3:101110200-101114200 ZNF genes & repeats Primary T cells from cord blood blood
26 chr3:101110400-101123800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
27 chr3:101110600-101113600 Weak transcription Primary T helper cells PMA-I stimulated --
28 chr3:101110600-101124000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
29 chr3:101110800-101132400 Weak transcription Primary T helper naive cells from peripheral blood blood
30 chr3:101111000-101115600 Weak transcription Primary Natural Killer cells fromperipheralblood blood
31 chr3:101111400-101111800 ZNF genes & repeats Primary B cells from peripheral blood blood
32 chr3:101111400-101111800 ZNF genes & repeats Liver Liver
33 chr3:101111400-101111800 ZNF genes & repeats Stomach Smooth Muscle stomach
34 chr3:101111400-101111800 ZNF genes & repeats Dnd41 blood
35 chr3:101111400-101112000 ZNF genes & repeats Primary B cells from cord blood blood
36 chr3:101111400-101112000 ZNF genes & repeats Duodenum Smooth Muscle Duodenum
37 chr3:101111400-101112000 ZNF genes & repeats Fetal Kidney kidney
38 chr3:101111400-101112200 ZNF genes & repeats Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
39 chr3:101111600-101111800 ZNF genes & repeats Lung lung
40 chr3:101111600-101113000 Weak transcription Primary hematopoietic stem cells blood
41 chr3:101111600-101138000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
42 chr3:101111600-101145800 Weak transcription Rectal Smooth Muscle rectum

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Last update: Aug 31, 2015