The 2.0 version of rSNPBase

Variant report

Variant rs16849835
Chromosome Location chr1:165695203-165695204
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:111 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165685200-165695400 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
2 chr1:165685200-165696600 Weak transcription Fetal Adrenal Gland Adrenal Gland
3 chr1:165685200-165721600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr1:165685600-165705200 Weak transcription Cortex derived primary cultured neurospheres brain
5 chr1:165687600-165695400 Weak transcription Osteobl bone
6 chr1:165687600-165695600 Weak transcription HUES6 Cell Line embryonic stem cell
7 chr1:165687600-165695600 Weak transcription Muscle Satellite Cultured Cells --
8 chr1:165687600-165695600 Weak transcription Fetal Thymus thymus
9 chr1:165687600-165695800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
10 chr1:165687600-165696200 Weak transcription NHLF lung
11 chr1:165687600-165696800 Weak transcription GM12878-XiMat blood
12 chr1:165687600-165705000 Weak transcription Thymus Thymus
13 chr1:165687600-165706000 Weak transcription HepG2 liver
14 chr1:165687600-165709800 Weak transcription HUES48 Cell Line embryonic stem cell
15 chr1:165687600-165709800 Weak transcription HUVEC blood vessel
16 chr1:165687600-165737600 Weak transcription ES-WA7 Cell Line embryonic stem cell
17 chr1:165687800-165695600 Weak transcription iPS-20b Cell Line embryonic stem cell
18 chr1:165687800-165695800 Weak transcription K562 blood
19 chr1:165687800-165696200 Weak transcription HUES64 Cell Line embryonic stem cell
20 chr1:165687800-165707000 Weak transcription ES-I3 Cell Line embryonic stem cell
21 chr1:165687800-165709800 Weak transcription iPS-18 Cell Line embryonic stem cell
22 chr1:165688800-165695400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
23 chr1:165688800-165695600 Weak transcription HSMMtube muscle
24 chr1:165689000-165695600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
25 chr1:165689200-165696400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
26 chr1:165689200-165696400 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
27 chr1:165690200-165710800 Weak transcription Pancreatic Islets Pancreatic Islet
28 chr1:165691000-165710000 Weak transcription Fetal Kidney kidney
29 chr1:165691200-165695600 Weak transcription Primary B cells from cord blood blood
30 chr1:165692200-165696000 Weak transcription HMEC breast
31 chr1:165692200-165697000 Weak transcription Lung lung
32 chr1:165692600-165697200 Weak transcription Fetal Intestine Small intestine
33 chr1:165693000-165695600 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:165693200-165695400 Weak transcription Primary neutrophils fromperipheralblood blood
35 chr1:165693200-165696000 Weak transcription Fetal Brain Female brain
36 chr1:165693200-165705600 Weak transcription Ovary ovary
37 chr1:165693400-165695400 Weak transcription Brain Hippocampus Middle brain
38 chr1:165693400-165709600 Weak transcription Colon Smooth Muscle Colon
39 chr1:165693600-165695400 Weak transcription Primary hematopoietic stem cells short term culture blood
40 chr1:165693600-165695400 Weak transcription Primary T helper cells PMA-I stimulated --
41 chr1:165693600-165695400 Weak transcription Adipose Nuclei Adipose
42 chr1:165693600-165695400 Weak transcription Brain Anterior Caudate brain
43 chr1:165693600-165695400 Weak transcription Brain Inferior Temporal Lobe brain
44 chr1:165693600-165695400 Weak transcription Fetal Muscle Leg muscle
45 chr1:165693800-165695400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
46 chr1:165693800-165695400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
47 chr1:165693800-165695400 Weak transcription Fetal Lung lung
48 chr1:165693800-165695400 Weak transcription Skeletal Muscle Male skeletal muscle
49 chr1:165693800-165697600 Weak transcription Stomach Mucosa stomach
50 chr1:165693800-165701000 Strong transcription Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015