The 2.0 version of rSNPBase

Variant report

Variant rs7525496
Chromosome Location chr1:165698726-165698727
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165685200-165721600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
2 chr1:165685600-165705200 Weak transcription Cortex derived primary cultured neurospheres brain
3 chr1:165687600-165705000 Weak transcription Thymus Thymus
4 chr1:165687600-165706000 Weak transcription HepG2 liver
5 chr1:165687600-165709800 Weak transcription HUES48 Cell Line embryonic stem cell
6 chr1:165687600-165709800 Weak transcription HUVEC blood vessel
7 chr1:165687600-165737600 Weak transcription ES-WA7 Cell Line embryonic stem cell
8 chr1:165687800-165707000 Weak transcription ES-I3 Cell Line embryonic stem cell
9 chr1:165687800-165709800 Weak transcription iPS-18 Cell Line embryonic stem cell
10 chr1:165690200-165710800 Weak transcription Pancreatic Islets Pancreatic Islet
11 chr1:165691000-165710000 Weak transcription Fetal Kidney kidney
12 chr1:165693200-165705600 Weak transcription Ovary ovary
13 chr1:165693400-165709600 Weak transcription Colon Smooth Muscle Colon
14 chr1:165693800-165701000 Strong transcription Rectal Mucosa Donor 31 rectum
15 chr1:165693800-165706000 Weak transcription Sigmoid Colon Sigmoid Colon
16 chr1:165694000-165706000 Weak transcription Rectal Smooth Muscle rectum
17 chr1:165694000-165708600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
18 chr1:165694000-165709800 Weak transcription Primary T helper naive cells from peripheral blood blood
19 chr1:165694000-165709800 Weak transcription Brain Substantia Nigra brain
20 chr1:165694000-165711800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
21 chr1:165694200-165705000 Weak transcription Left Ventricle heart
22 chr1:165694200-165709800 Weak transcription Colonic Mucosa Colon
23 chr1:165694200-165709800 Weak transcription Pancreas Pancrea
24 chr1:165694200-165709800 Weak transcription Spleen Spleen
25 chr1:165694200-165710000 Weak transcription NHEK skin
26 chr1:165694200-165721600 Weak transcription Aorta Aorta
27 chr1:165694200-165721600 Weak transcription Esophagus oesophagus
28 chr1:165694400-165699200 Strong transcription Liver Liver
29 chr1:165694400-165705800 Strong transcription Primary Natural Killer cells fromperipheralblood blood
30 chr1:165694400-165721600 Strong transcription Primary T helper cells fromperipheralblood blood
31 chr1:165694600-165699800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
32 chr1:165694600-165701600 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
33 chr1:165694600-165709800 Weak transcription Placenta Amnion Placenta Amnion
34 chr1:165694600-165711000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
35 chr1:165694600-165711000 Weak transcription Primary T killer naive cells fromperipheralblood blood
36 chr1:165694600-165736800 Strong transcription Monocytes-CD14+_RO01746 blood
37 chr1:165694800-165700400 Strong transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
38 chr1:165694800-165709800 Weak transcription Small Intestine intestine
39 chr1:165695200-165698800 Strong transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
40 chr1:165695400-165698800 Strong transcription Primary neutrophils fromperipheralblood blood
41 chr1:165695400-165699200 Strong transcription Primary hematopoietic stem cells short term culture blood
42 chr1:165695600-165700400 Strong transcription Primary mononuclear cells fromperipheralblood Blood
43 chr1:165695600-165701400 Strong transcription Fetal Muscle Trunk muscle
44 chr1:165695600-165701600 Strong transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
45 chr1:165695600-165708600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
46 chr1:165695600-165709800 Weak transcription Brain Angular Gyrus brain
47 chr1:165695800-165705400 Weak transcription Fetal Lung lung
48 chr1:165695800-165712000 Weak transcription Psoas Muscle Psoas
49 chr1:165696000-165709800 Weak transcription HUES6 Cell Line embryonic stem cell
50 chr1:165696000-165721600 Weak transcription Gastric stomach

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Last update: Aug 31, 2015