The 2.0 version of rSNPBase

Variant report

Variant rs7522083
Chromosome Location chr1:165727568-165727569
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:123 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:165687600-165737600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:165694600-165736800 Strong transcription Monocytes-CD14+_RO01746 blood
3 chr1:165711200-165736200 Weak transcription Pancreatic Islets Pancreatic Islet
4 chr1:165712200-165737000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
5 chr1:165712600-165737000 Weak transcription Colonic Mucosa Colon
6 chr1:165713400-165733600 Weak transcription NHEK skin
7 chr1:165713600-165737000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
8 chr1:165716800-165728000 Strong transcription Primary hematopoietic stem cells short term culture blood
9 chr1:165717400-165728000 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
10 chr1:165720800-165733400 Weak transcription A549 lung
11 chr1:165721800-165728800 Weak transcription Brain Substantia Nigra brain
12 chr1:165721800-165728800 Strong transcription Fetal Intestine Large intestine
13 chr1:165721800-165729200 Strong transcription Rectal Mucosa Donor 29 rectum
14 chr1:165721800-165730800 Strong transcription Primary T helper cells fromperipheralblood blood
15 chr1:165721800-165731000 Strong transcription Primary Natural Killer cells fromperipheralblood blood
16 chr1:165721800-165731200 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
17 chr1:165721800-165732600 Strong transcription Primary T regulatory cells fromperipheralblood blood
18 chr1:165721800-165732600 Weak transcription Primary T killer memory cells from peripheral blood blood
19 chr1:165721800-165732600 Weak transcription Rectal Smooth Muscle rectum
20 chr1:165721800-165732800 Weak transcription Primary T killer naive cells fromperipheralblood blood
21 chr1:165721800-165732800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
22 chr1:165721800-165734800 Weak transcription ES-I3 Cell Line embryonic stem cell
23 chr1:165721800-165734800 Weak transcription Brain Cingulate Gyrus brain
24 chr1:165721800-165734800 Weak transcription Esophagus oesophagus
25 chr1:165721800-165735200 Weak transcription H9 Cell Line embryonic stem cell
26 chr1:165721800-165736600 Weak transcription Stomach Mucosa stomach
27 chr1:165721800-165737000 Weak transcription Fetal Brain Male brain
28 chr1:165721800-165737000 Weak transcription Fetal Heart heart
29 chr1:165721800-165737000 Weak transcription Right Atrium heart
30 chr1:165721800-165737200 Weak transcription H1 Cell Line embryonic stem cell
31 chr1:165721800-165737600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
32 chr1:165722000-165727800 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
33 chr1:165722400-165732800 Weak transcription HepG2 liver
34 chr1:165722400-165735000 Weak transcription HSMMtube muscle
35 chr1:165722600-165733400 Weak transcription Brain Anterior Caudate brain
36 chr1:165722600-165733600 Weak transcription Skeletal Muscle Male skeletal muscle
37 chr1:165722600-165736800 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
38 chr1:165722800-165729200 Strong transcription Fetal Kidney kidney
39 chr1:165722800-165734800 Weak transcription Placenta Amnion Placenta Amnion
40 chr1:165723000-165729400 Weak transcription Thymus Thymus
41 chr1:165723000-165730400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
42 chr1:165723000-165730400 Weak transcription Gastric stomach
43 chr1:165723000-165730600 Weak transcription Lung lung
44 chr1:165723000-165736800 Weak transcription Spleen Spleen
45 chr1:165723200-165732800 Weak transcription Pancreas Pancrea
46 chr1:165723200-165736800 Weak transcription Colon Smooth Muscle Colon
47 chr1:165723400-165729600 Weak transcription Fetal Brain Female brain
48 chr1:165723400-165734800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr1:165723600-165728200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
50 chr1:165723600-165728400 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015