The 2.0 version of rSNPBase

Variant report

Variant rs16862959
Chromosome Location chr1:169994974-169994975
allele C/G
Outlinks Ensembl   UCSC
Chromatin state (count:77 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:169904000-170010400 Weak transcription Aorta Aorta
2 chr1:169922400-169996400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
3 chr1:169951600-170011800 Weak transcription Primary T helper naive cells from peripheral blood blood
4 chr1:169952000-170018000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr1:169952400-170043000 Weak transcription Skeletal Muscle Female skeletal muscle
6 chr1:169956800-169997400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
7 chr1:169967600-170013000 Weak transcription Fetal Heart heart
8 chr1:169968800-169999400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
9 chr1:169968800-170010800 Weak transcription Colon Smooth Muscle Colon
10 chr1:169968800-170020200 Weak transcription Brain Angular Gyrus brain
11 chr1:169969000-169997400 Weak transcription Fetal Stomach stomach
12 chr1:169969000-170012600 Weak transcription Brain Inferior Temporal Lobe brain
13 chr1:169969600-170017800 Weak transcription Esophagus oesophagus
14 chr1:169971400-169996400 Weak transcription NHDF-Ad bronchial
15 chr1:169979400-169995800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
16 chr1:169979400-170018000 Weak transcription Brain Cingulate Gyrus brain
17 chr1:169979800-170015200 Weak transcription HMEC breast
18 chr1:169980000-170006600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
19 chr1:169980600-169997400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
20 chr1:169981600-170013400 Weak transcription Lung lung
21 chr1:169982400-170020600 Weak transcription Rectal Smooth Muscle rectum
22 chr1:169983000-170017200 Weak transcription HSMMtube muscle
23 chr1:169983400-169995400 Weak transcription Monocytes-CD14+_RO01746 blood
24 chr1:169983400-169996000 Weak transcription Primary monocytes fromperipheralblood blood
25 chr1:169983800-170017600 Weak transcription Spleen Spleen
26 chr1:169984600-170020800 Weak transcription Gastric stomach
27 chr1:169984800-170027600 Weak transcription Primary T killer naive cells fromperipheralblood blood
28 chr1:169985000-169995400 Weak transcription GM12878-XiMat blood
29 chr1:169985000-169996600 Weak transcription Primary T helper naive cells fromperipheralblood blood
30 chr1:169985000-170010800 Weak transcription Brain Hippocampus Middle brain
31 chr1:169985000-170012800 Weak transcription Brain Anterior Caudate brain
32 chr1:169985200-169997000 Weak transcription Primary B cells from cord blood blood
33 chr1:169985200-170020400 Weak transcription Primary T killer memory cells from peripheral blood blood
34 chr1:169985800-169996400 Weak transcription Duodenum Smooth Muscle Duodenum
35 chr1:169985800-170003000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
36 chr1:169985800-170010800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
37 chr1:169985800-170010800 Weak transcription Rectal Mucosa Donor 29 rectum
38 chr1:169986000-169996600 Weak transcription Primary B cells from peripheral blood blood
39 chr1:169986200-169995000 Weak transcription Pancreas Pancrea
40 chr1:169986200-169995200 Weak transcription Duodenum Mucosa Duodenum
41 chr1:169986200-169995600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr1:169986200-169996000 Weak transcription Fetal Intestine Large intestine
43 chr1:169986200-169996200 Weak transcription Primary T helper cells PMA-I stimulated --
44 chr1:169986200-169996400 Weak transcription Adipose Nuclei Adipose
45 chr1:169986200-169996600 Weak transcription Primary T cells from cord blood blood
46 chr1:169986200-170006600 Weak transcription Ovary ovary
47 chr1:169986200-170010600 Weak transcription Stomach Smooth Muscle stomach
48 chr1:169986400-169995400 Weak transcription Primary hematopoietic stem cells blood
49 chr1:169986400-169996200 Weak transcription Fetal Thymus thymus
50 chr1:169986400-170013600 Weak transcription Left Ventricle heart

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Last update: Aug 31, 2015