Variant report

Variant	rs16867832
Chromosome Location	chr6:70330981-70330982
allele	A/C
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 19 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:18)

rs_ID	r²[population]
rs11964740	1.00[EUR][1000 genomes]
rs11967207	1.00[EUR][1000 genomes]
rs11969169	1.00[CEU][hapmap]
rs12201256	0.85[AFR][1000 genomes];1.00[ASN][1000 genomes]
rs2445966	1.00[CEU][hapmap]
rs2445967	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs28756753	0.87[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3214020	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs34857559	0.81[AFR][1000 genomes]
rs4457128	1.00[MEX][hapmap];1.00[TSI][hapmap]
rs6905740	1.00[CEU][hapmap]
rs6909705	0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6911500	1.00[CEU][hapmap];0.88[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6920889	1.00[CEU][hapmap]
rs6934036	0.86[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs7768139	0.80[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs9454898	1.00[CEU][hapmap];1.00[MEX][hapmap]
rs991974	1.00[MEX][hapmap];1.00[TSI][hapmap]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1022847	chr6:70300521-70337899	Enhancers Bivalent Enhancer Weak transcription Active TSS	TF binding region Chromatin interactive region	3 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:70329400-70341400	Weak transcription	H9 Cell Line	embryonic stem cell
2	chr6:70330200-70331000	Enhancers	iPS-18 Cell Line	embryonic stem cell

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dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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