Variant report

Variant	rs16870718
Chromosome Location	chr7:121502874-121502875
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

No.	Distal block	Cell Line	Cell type	Cell Stage
1	chr7:121500985..121503784-chr7:121505608..121507166,2	K562	blood:

Extended variants
information (count: 33 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:30)

rs_ID	r²[population]
rs10225186	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs10270557	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10488056	0.84[AFR][1000 genomes]
rs10953948	0.89[ASN][1000 genomes]
rs10953949	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs10953950	0.91[AMR][1000 genomes];0.85[EUR][1000 genomes];0.87[ASN][1000 genomes]
rs11543745	0.89[ASN][1000 genomes]
rs11982728	0.88[AMR][1000 genomes];0.81[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs12671267	0.88[ASN][1000 genomes]
rs12673871	0.80[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs35807933	0.89[ASN][1000 genomes]
rs3757551	0.80[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs3801380	0.85[ASN][1000 genomes]
rs57309972	0.87[AFR][1000 genomes]
rs58082429	0.87[AFR][1000 genomes]
rs58853157	0.84[AFR][1000 genomes]
rs59694519	0.90[AFR][1000 genomes]
rs6949816	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6965735	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs6966138	0.82[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs73434988	0.86[AFR][1000 genomes]
rs73434990	0.81[AFR][1000 genomes]
rs73434994	0.81[AFR][1000 genomes]
rs73717719	0.84[ASN][1000 genomes]
rs740965	0.85[ASN][1000 genomes]
rs7778688	0.90[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7797043	0.87[AMR][1000 genomes];0.88[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs7797092	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs7798109	0.91[AMR][1000 genomes];0.83[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs917722	0.96[AMR][1000 genomes];0.87[EUR][1000 genomes];0.89[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:3 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429808	chr7:121384049-121600049	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	esv1802911	chr7:121489994-121524500	Enhancers Weak transcription Active TSS Flanking Active TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
3	esv1798234	chr7:121494164-121505847	Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:2 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121500800-121512800	Weak transcription	Aorta	Aorta
2	chr7:121502800-121503400	Enhancers	Fetal Lung	lung

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