Variant report

rSNPs within LD-proxies of this variant (count:25)

rs_ID	r²[population]
rs10225186	0.92[ASN][1000 genomes]
rs10270557	0.94[ASN][1000 genomes]
rs10953948	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs10953949	0.94[ASN][1000 genomes]
rs10953950	0.92[ASN][1000 genomes]
rs11543745	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs11982728	0.94[ASN][1000 genomes]
rs12671267	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];1.00[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs12673871	0.85[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs16870718	0.84[ASN][1000 genomes]
rs2052133	0.90[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs35807933	0.98[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs3757551	0.81[EUR][1000 genomes]
rs58748383	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs59375388	0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs6949816	0.94[ASN][1000 genomes]
rs6965735	0.83[EUR][1000 genomes]
rs6966138	0.83[EUR][1000 genomes]
rs73433083	0.90[AMR][1000 genomes]
rs73433091	0.93[AMR][1000 genomes];0.93[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs7778688	0.94[ASN][1000 genomes]
rs7797092	0.94[ASN][1000 genomes]
rs7798109	0.94[ASN][1000 genomes]
rs7809753	0.88[AMR][1000 genomes];0.81[ASN][1000 genomes]
rs917722	0.81[EUR][1000 genomes];0.95[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429808	chr7:121384049-121600049	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:3 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121463600-121466400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
2	chr7:121463800-121468800	Weak transcription	Ganglion Eminence derived primary cultured neurospheres	brain
3	chr7:121463800-121469800	Weak transcription	Cortex derived primary cultured neurospheres	brain

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