Variant report

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10225186	0.81[ASN][1000 genomes]
rs10270557	0.82[ASN][1000 genomes]
rs10953948	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs10953949	0.82[ASN][1000 genomes]
rs10953950	0.81[ASN][1000 genomes]
rs11543745	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs11982728	0.82[ASN][1000 genomes]
rs12671267	0.87[AFR][1000 genomes];0.97[AMR][1000 genomes];0.96[EUR][1000 genomes];0.84[ASN][1000 genomes]
rs12673871	0.81[EUR][1000 genomes]
rs2052133	0.90[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs35807933	0.94[EUR][1000 genomes];0.83[ASN][1000 genomes]
rs59375388	0.88[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs6949816	0.82[ASN][1000 genomes]
rs6965735	0.80[ASN][1000 genomes]
rs6966138	0.80[ASN][1000 genomes]
rs73433083	0.90[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs73433091	0.93[AMR][1000 genomes];0.96[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs73717719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];0.96[EUR][1000 genomes];0.86[ASN][1000 genomes]
rs7778688	0.82[ASN][1000 genomes]
rs7797092	0.82[ASN][1000 genomes]
rs7798109	0.82[ASN][1000 genomes]
rs7809753	0.88[AMR][1000 genomes];0.94[ASN][1000 genomes]
rs917722	0.83[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv429808	chr7:121384049-121600049	Weak transcription Active TSS Bivalent/Poised TSS Flanking Active TSS Enhancers Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr7:121462400-121463800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
2	chr7:121462600-121463800	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
3	chr7:121462800-121463800	Enhancers	Cortex derived primary cultured neurospheres	brain
4	chr7:121463400-121463800	Enhancers	Ganglion Eminence derived primary cultured neurospheres	brain
5	chr7:121463600-121465000	Enhancers	HepG2	liver
6	chr7:121463600-121466400	Weak transcription	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived

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