Variant report

Variant rs168712
Chromosome Location chr5:145396585-145396586
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:37 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145362200-145399200 Weak transcription Placenta Amnion Placenta Amnion
2 chr5:145362600-145404400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:145373200-145406800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr5:145373400-145396800 Weak transcription Left Ventricle heart
5 chr5:145373400-145408800 Weak transcription Aorta Aorta
6 chr5:145373400-145428400 Weak transcription Fetal Stomach stomach
7 chr5:145379400-145412200 Weak transcription Right Ventricle heart
8 chr5:145385400-145398400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
9 chr5:145385800-145396600 Weak transcription Osteobl bone
10 chr5:145386800-145405400 Weak transcription Small Intestine intestine
11 chr5:145387800-145404200 Weak transcription HepG2 liver
12 chr5:145388000-145404400 Weak transcription Stomach Mucosa stomach
13 chr5:145392200-145397200 Strong transcription Fetal Intestine Large intestine
14 chr5:145392200-145397200 Strong transcription Rectal Mucosa Donor 29 rectum
15 chr5:145392200-145398000 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:145392200-145398000 Strong transcription NHEK skin
17 chr5:145392200-145404600 Weak transcription Hela-S3 cervix
18 chr5:145392400-145396800 Weak transcription Adipose Nuclei Adipose
19 chr5:145392600-145397200 Strong transcription Liver Liver
20 chr5:145392600-145397800 Strong transcription HMEC breast
21 chr5:145392600-145398000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
22 chr5:145392600-145398600 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
23 chr5:145392800-145397400 Strong transcription Duodenum Mucosa Duodenum
24 chr5:145392800-145397400 Strong transcription Rectal Mucosa Donor 31 rectum
25 chr5:145392800-145406600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
26 chr5:145393600-145396600 Weak transcription Sigmoid Colon Sigmoid Colon
27 chr5:145393800-145406600 Weak transcription Esophagus oesophagus
28 chr5:145393800-145408000 Weak transcription Gastric stomach
29 chr5:145394200-145407200 Weak transcription NH-A brain
30 chr5:145394400-145399600 Weak transcription Psoas Muscle Psoas
31 chr5:145394600-145399800 Weak transcription Skeletal Muscle Female skeletal muscle
32 chr5:145394600-145404800 Weak transcription Colonic Mucosa Colon
33 chr5:145395000-145404600 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
34 chr5:145395600-145396600 Weak transcription Fetal Intestine Small intestine
35 chr5:145396200-145396600 Genic enhancers Breast Myoepithelial Primary Cells Breast
36 chr5:145396400-145397600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
37 chr5:145396400-145404800 Weak transcription Pancreas Pancrea

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