Variant report

Variant	rs35821941
Chromosome Location	chr5:145421233-145421234
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:74)
CpG islands
(count:0)
Chromatin interactive
region (count:3)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:74 , 50 per page) page: 1 2

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	CTCF	chr5:145421051-145421276	A549	lung:	n/a	n/a
2	CTCF	chr5:145421100-145421250	HCM	heart:	n/a	n/a
3	RAD21	chr5:145420869-145421328	HepG2	liver:	n/a	n/a
4	CTCF	chr5:145421070-145421261	MCF-7	breast:	n/a	n/a
5	RAD21	chr5:145420936-145421392	ECC-1	luminal epithelium:	n/a	n/a
6	CTCF	chr5:145421195-145421234	NHEK	skin:	n/a	n/a
7	CTCF	chr5:145421100-145421250	MCF-7	breast:	n/a	n/a
8	CTCF	chr5:145420922-145421294	H1-hESC	embryonic stem cell:	n/a	n/a
9	RAD21	chr5:145420884-145421411	ECC-1	luminal epithelium:	n/a	n/a
10	RAD21	chr5:145420918-145421358	A549	lung:	n/a	n/a
11	CTCF	chr5:145420959-145421334	GM12878	blood:	n/a	n/a
12	CTCF	chr5:145421140-145421290	Caco-2	colon:	n/a	n/a
13	CTCF	chr5:145421100-145421250	SK-N-SH_RA	brain:	n/a	n/a
14	MAX	chr5:145420876-145421404	K562	blood:	n/a	n/a
15	ZNF143	chr5:145421030-145421293	K562	blood:	n/a	n/a
16	RAD21	chr5:145420984-145421321	H1-hESC	embryonic stem cell:	n/a	n/a
17	CTCF	chr5:145421051-145421249	Hela-S3	cervix:	n/a	n/a
18	RAD21	chr5:145420979-145421315	SK-N-SH_RA	brain:	n/a	n/a
19	CTCF	chr5:145421036-145421257	GM12878	blood:	n/a	n/a
20	CTCF	chr5:145421140-145421290	BE2_C	brain:	n/a	n/a
21	CTCF	chr5:145421138-145421285	A549	lung:	n/a	n/a
22	RAD21	chr5:145420924-145421305	Hela-S3	cervix:	n/a	n/a
23	CTCF	chr5:145421197-145421255	GM19238	blood:	n/a	n/a
24	CTCF	chr5:145421100-145421250	GM12801	blood:	n/a	n/a
25	CTCF	chr5:145421100-145421250	GM12871	blood:	n/a	n/a
26	CTCF	chr5:145421100-145421250	NHLF	lung:	n/a	n/a
27	CTCF	chr5:145421001-145421293	MCF-7	breast:	n/a	n/a
28	CTCF	chr5:145420990-145421274	K562	blood:	n/a	n/a
29	CTCF	chr5:145420687-145421506	A549	lung:	n/a	n/a
30	CTCF	chr5:145421120-145421270	AG09309	skin:	n/a	n/a
31	CTCF	chr5:145421220-145421370	HAc	cerebellar:	n/a	n/a
32	RAD21	chr5:145420961-145421261	HepG2	liver:	n/a	n/a
33	CTCF	chr5:145421189-145421284	MCF-7	breast:	n/a	n/a
34	CTCF	chr5:145421020-145421251	HUVEC	blood vessel:	n/a	n/a
35	CTCF	chr5:145421043-145421242	LNCaP	prostate:	n/a	n/a
36	RAD21	chr5:145420905-145421264	H1-hESC	embryonic stem cell:	n/a	n/a
37	RAD21	chr5:145420850-145421356	H1-hESC	embryonic stem cell:	n/a	n/a
38	CBX3	chr5:145420679-145421558	K562	blood:	n/a	n/a
39	GATA1	chr5:145420036-145421587	PBDE	blood:	n/a	chr5:145420822-145420830
40	RCOR1	chr5:145420996-145421281	K562	blood:	n/a	n/a
41	CUX1	chr5:145420980-145421268	K562	blood:	n/a	n/a
42	CTCF	chr5:145421193-145421298	MCF-7	breast:	n/a	n/a
43	RAD21	chr5:145420996-145421280	SK-N-SH_RA	brain:	n/a	n/a
44	RAD21	chr5:145420969-145421301	HepG2	liver:	n/a	n/a
45	CTCF	chr5:145421140-145421290	NHEK	skin:	n/a	n/a
46	CTCF	chr5:145421100-145421250	GM12872	blood:	n/a	n/a
47	CTCF	chr5:145421132-145421238	ProgFib	skin:	n/a	n/a
48	CTCF	chr5:145420930-145421370	MCF-7	breast:	n/a	n/a
49	TAL1	chr5:145421089-145421351	K562	blood:	n/a	n/a
50	JUND	chr5:145421051-145421316	K562	blood:	n/a	n/a

No data

(count:3 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr5:145419348..145421687-chr5:145425809..145428439,2	MCF-7	breast:
2	chr5:145418838..145422212-chr5:145426068..145429062,3	K562	blood:
3	chr5:145411912..145413559-chr5:145419162..145422103,2	K562	blood:

No data

Variant related genes	Relation type
SH3RF2	TF binding region

Extended variants
information (count: 158 )
Associated
traits (count: 2 )

rSNPs within LD-proxies of this variant (count:158)

rs_ID	r²[population]
rs10463379	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs10463381	0.90[AFR][1000 genomes];0.86[EUR][1000 genomes];0.91[ASN][1000 genomes]
rs10463382	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1056149	0.81[AMR][1000 genomes];0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11167924	0.83[EUR][1000 genomes]
rs11167925	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11167926	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11167927	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11167928	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11167929	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs1158395	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs1160791	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs11738320	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11738329	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11739231	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs11739577	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11740034	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11740294	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11740577	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11740646	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11741665	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11741958	0.81[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11742574	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11742599	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11742606	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11743632	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11743638	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11744031	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11744037	0.95[AMR][1000 genomes];0.98[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11746712	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11746953	0.86[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11747075	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11747459	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11748213	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11748238	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs11749557	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11749886	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs11750281	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs11949400	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs11950760	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12187381	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs12188401	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs12520083	0.87[ASN][1000 genomes]
rs12522478	0.90[ASN][1000 genomes]
rs12652801	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs13157647	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13159280	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs13163457	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13163787	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13170195	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13171465	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs13181933	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs13182298	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs1558147	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs166047	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs168711	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs168712	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs17212260	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17212359	0.81[AMR][1000 genomes];0.94[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs173587	0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs17426347	0.89[ASN][1000 genomes]
rs17426499	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17426578	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17492228	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs17796750	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs17796792	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs185089	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1859894	0.90[ASN][1000 genomes]
rs1859895	0.92[AFR][1000 genomes];0.99[AMR][1000 genomes];0.96[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs187465	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs187466	0.92[AMR][1000 genomes];0.96[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs1974569	0.84[ASN][1000 genomes]
rs2024059	0.82[AMR][1000 genomes];0.92[EUR][1000 genomes];0.85[ASN][1000 genomes]
rs2024060	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2024061	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2024062	0.92[AMR][1000 genomes];0.98[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2079533	0.81[AMR][1000 genomes];0.88[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2079534	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2097969	0.81[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2190796	0.80[EUR][1000 genomes];0.88[ASN][1000 genomes]
rs2215009	0.82[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2215010	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2400207	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs248771	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248772	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248773	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248774	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248775	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248776	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248777	0.89[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248778	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248779	0.91[AMR][1000 genomes];0.96[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248780	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs248781	0.89[AMR][1000 genomes];0.92[EUR][1000 genomes];0.95[ASN][1000 genomes]
rs248783	0.90[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs248784	0.88[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs248785	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2895646	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs2906817	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2906819	0.86[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs2906820	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs2962518	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2962519	0.91[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2962520	0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs2962522	0.93[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs3733937	0.94[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs4141240	0.90[ASN][1000 genomes]
rs4266461	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4502881	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4526155	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs4571521	0.81[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4912703	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs4913060	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs62392691	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6580402	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6580403	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6580404	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6580406	0.91[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6858982	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6864121	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6869873	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6871772	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6872997	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6876287	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6876373	0.80[EUR][1000 genomes];0.89[ASN][1000 genomes]
rs6876582	0.81[AMR][1000 genomes];0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6877694	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6879927	0.83[ASN][1000 genomes]
rs6879988	0.93[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6882211	0.80[AFR][1000 genomes];0.98[AMR][1000 genomes];0.97[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6889715	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6890967	0.88[AMR][1000 genomes];0.92[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6891636	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs6891869	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6893852	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs6894532	0.97[AFR][1000 genomes];0.99[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs6895584	0.86[AFR][1000 genomes];0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6896268	0.98[AMR][1000 genomes];0.98[EUR][1000 genomes];0.99[ASN][1000 genomes]
rs6897800	0.94[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs6898375	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs6898385	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs6898427	0.97[AFR][1000 genomes];0.98[AMR][1000 genomes];0.99[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs740368	0.87[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7444347	0.92[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs758037	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs758038	0.81[AMR][1000 genomes];0.90[ASN][1000 genomes]
rs7703851	0.92[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7706656	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7713773	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7715679	0.93[AMR][1000 genomes];0.95[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs7715846	0.82[AMR][1000 genomes];0.89[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs7716076	0.85[AMR][1000 genomes];0.88[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7730462	0.96[AMR][1000 genomes];0.99[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs7733648	0.95[AMR][1000 genomes];0.99[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs9325000	0.80[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs9325002	0.94[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs977204	0.90[ASN][1000 genomes]
rs977205	0.90[ASN][1000 genomes]

mRNA abundance (count:2)

SNP	Gene	Cis/trans	Tissue	Source
rs35821941	LARS	cis	Thyroid	GTEx
rs35821941	LARS	Cis_1M	lymphoblastoid	RTeQTL

Chromatin state (count:36 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:145373400-145428400	Weak transcription	Fetal Stomach	stomach
2	chr5:145407600-145421600	Weak transcription	NH-A	brain
3	chr5:145412600-145453200	Weak transcription	Pancreas	Pancrea
4	chr5:145414000-145435200	Weak transcription	Aorta	Aorta
5	chr5:145417800-145423000	Enhancers	Fetal Intestine Large	intestine
6	chr5:145418400-145422200	Enhancers	Rectal Mucosa Donor 31	rectum
7	chr5:145418400-145423400	Enhancers	Rectal Mucosa Donor 29	rectum
8	chr5:145419000-145422000	Enhancers	Hela-S3	cervix
9	chr5:145419000-145423400	Enhancers	Breast variant Human Mammary Epithelial Cells (vHMEC)	Breast
10	chr5:145419200-145422000	Enhancers	K562	blood
11	chr5:145419200-145423000	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
12	chr5:145419200-145423400	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Female	--
13	chr5:145419400-145423600	Enhancers	Stomach Mucosa	stomach
14	chr5:145419400-145423800	Enhancers	HMEC	breast
15	chr5:145420000-145423000	Enhancers	Colonic Mucosa	Colon
16	chr5:145420000-145423000	Enhancers	Esophagus	oesophagus
17	chr5:145420000-145423000	Enhancers	Sigmoid Colon	Sigmoid Colon
18	chr5:145420400-145421600	Genic enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
19	chr5:145420400-145423000	Enhancers	H1 Derived Mesenchymal Stem Cells	ES cell derived
20	chr5:145420400-145423000	Enhancers	IMR90 fetal lung fibroblasts Cell Line	lung
21	chr5:145420400-145423000	Enhancers	Duodenum Mucosa	Duodenum
22	chr5:145420600-145421600	Enhancers	Gastric	stomach
23	chr5:145420600-145423000	Enhancers	Small Intestine	intestine
24	chr5:145420800-145422000	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
25	chr5:145420800-145422800	Genic enhancers	Fetal Intestine Small	intestine
26	chr5:145421000-145421400	Genic enhancers	Breast Myoepithelial Primary Cells	Breast
27	chr5:145421000-145421600	Enhancers	NHEK	skin
28	chr5:145421000-145422000	Weak transcription	ES-I3 Cell Line	embryonic stem cell
29	chr5:145421000-145422000	Weak transcription	Primary monocytes fromperipheralblood	blood
30	chr5:145421000-145422000	Weak transcription	Primary hematopoietic stem cells short term culture	blood
31	chr5:145421000-145422000	Weak transcription	Monocytes-CD14+_RO01746	blood
32	chr5:145421000-145422200	Weak transcription	HUES6 Cell Line	embryonic stem cell
33	chr5:145421000-145426000	Weak transcription	Skeletal Muscle Female	skeletal muscle
34	chr5:145421200-145422200	Weak transcription	Left Ventricle	heart
35	chr5:145421200-145422800	Enhancers	Placenta Amnion	Placenta Amnion
36	chr5:145421200-145423000	Enhancers	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived

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