Variant report

Variant rs1859894
Chromosome Location chr5:145386138-145386139
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:38 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr5:145362200-145399200 Weak transcription Placenta Amnion Placenta Amnion
2 chr5:145362600-145404400 Weak transcription Skeletal Muscle Male skeletal muscle
3 chr5:145368400-145386600 Weak transcription HepG2 liver
4 chr5:145369400-145393400 Weak transcription Skeletal Muscle Female skeletal muscle
5 chr5:145369600-145393400 Weak transcription NH-A brain
6 chr5:145370000-145392800 Weak transcription Colonic Mucosa Colon
7 chr5:145370800-145386400 Weak transcription Gastric stomach
8 chr5:145373200-145406800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr5:145373400-145392800 Weak transcription Esophagus oesophagus
10 chr5:145373400-145396800 Weak transcription Left Ventricle heart
11 chr5:145373400-145408800 Weak transcription Aorta Aorta
12 chr5:145373400-145428400 Weak transcription Fetal Stomach stomach
13 chr5:145379000-145387600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
14 chr5:145379200-145386200 Weak transcription Fetal Intestine Large intestine
15 chr5:145379400-145389400 Strong transcription Foreskin Keratinocyte Primary Cells skin02 Skin
16 chr5:145379400-145412200 Weak transcription Right Ventricle heart
17 chr5:145380000-145389000 Strong transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
18 chr5:145381400-145386600 Weak transcription Stomach Mucosa stomach
19 chr5:145381400-145387000 Strong transcription NHEK skin
20 chr5:145381400-145388800 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
21 chr5:145381600-145392200 Weak transcription Rectal Mucosa Donor 29 rectum
22 chr5:145382400-145386600 Weak transcription Fetal Intestine Small intestine
23 chr5:145384800-145386600 Genic enhancers Duodenum Mucosa Duodenum
24 chr5:145384800-145387200 Enhancers Primary monocytes fromperipheralblood blood
25 chr5:145384800-145388000 Enhancers Liver Liver
26 chr5:145385000-145387600 Strong transcription Breast Myoepithelial Primary Cells Breast
27 chr5:145385200-145386800 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr5:145385400-145386200 Weak transcription HMEC breast
29 chr5:145385400-145398400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
30 chr5:145385800-145386200 Weak transcription Sigmoid Colon Sigmoid Colon
31 chr5:145385800-145386400 Enhancers Primary neutrophils fromperipheralblood blood
32 chr5:145385800-145386800 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
33 chr5:145385800-145386800 Enhancers Pancreas Pancrea
34 chr5:145385800-145386800 Enhancers Small Intestine intestine
35 chr5:145385800-145388000 Enhancers Fetal Adrenal Gland Adrenal Gland
36 chr5:145385800-145396600 Weak transcription Osteobl bone
37 chr5:145386000-145386400 Enhancers Primary hematopoietic stem cells short term culture blood
38 chr5:145386000-145386800 Flanking Active TSS Monocytes-CD14+_RO01746 blood

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