Variant report
| Variant | rs16872715 |
|---|---|
| Chromosome Location | chr6:44815608-44815609 |
| allele | A/G |
| Outlinks | Ensembl UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:0)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
| No data |
rSNPs within LD-proxies of this variant (count:74)
| rs_ID | r2[population] |
|---|---|
| rs1402597 | 1.00[AFR][1000 genomes] |
| rs1411149 | 1.00[AFR][1000 genomes] |
| rs16872599 | 1.00[AFR][1000 genomes] |
| rs16872702 | 1.00[AFR][1000 genomes] |
| rs16872738 | 1.00[AFR][1000 genomes] |
| rs16872741 | 1.00[AFR][1000 genomes] |
| rs16872742 | 0.83[AFR][1000 genomes] |
| rs16872844 | 1.00[AFR][1000 genomes] |
| rs16872874 | 1.00[AFR][1000 genomes] |
| rs16872894 | 1.00[AFR][1000 genomes] |
| rs16872910 | 1.00[AFR][1000 genomes] |
| rs16872923 | 1.00[AFR][1000 genomes] |
| rs55806924 | 1.00[AFR][1000 genomes] |
| rs55905150 | 1.00[AFR][1000 genomes] |
| rs56310184 | 1.00[AFR][1000 genomes] |
| rs56354231 | 1.00[AFR][1000 genomes] |
| rs57619602 | 1.00[AFR][1000 genomes] |
| rs57864178 | 1.00[AFR][1000 genomes] |
| rs57953368 | 1.00[AFR][1000 genomes] |
| rs58164361 | 1.00[AFR][1000 genomes] |
| rs58902965 | 1.00[AFR][1000 genomes] |
| rs58929603 | 1.00[AFR][1000 genomes] |
| rs59093912 | 1.00[AFR][1000 genomes] |
| rs61700790 | 1.00[AFR][1000 genomes] |
| rs73734735 | 1.00[AFR][1000 genomes] |
| rs73734760 | 1.00[AFR][1000 genomes] |
| rs73734767 | 1.00[AFR][1000 genomes] |
| rs73734770 | 1.00[AFR][1000 genomes] |
| rs73734771 | 1.00[AFR][1000 genomes] |
| rs73734772 | 1.00[AFR][1000 genomes] |
| rs73734775 | 1.00[AFR][1000 genomes] |
| rs73734782 | 1.00[AFR][1000 genomes] |
| rs73735212 | 1.00[AFR][1000 genomes] |
| rs73735213 | 1.00[AFR][1000 genomes] |
| rs73735221 | 1.00[AFR][1000 genomes] |
| rs73735224 | 1.00[AFR][1000 genomes] |
| rs73735225 | 1.00[AFR][1000 genomes] |
| rs73735229 | 0.83[AFR][1000 genomes] |
| rs73735231 | 0.83[AFR][1000 genomes] |
| rs73735235 | 1.00[AFR][1000 genomes] |
| rs73735236 | 1.00[AFR][1000 genomes] |
| rs73735254 | 1.00[AFR][1000 genomes] |
| rs73735259 | 1.00[AFR][1000 genomes] |
| rs73735261 | 1.00[AFR][1000 genomes] |
| rs73735265 | 1.00[AFR][1000 genomes] |
| rs73735270 | 1.00[AFR][1000 genomes] |
| rs73735285 | 1.00[AFR][1000 genomes] |
| rs73735286 | 1.00[AFR][1000 genomes] |
| rs73735290 | 1.00[AFR][1000 genomes] |
| rs73735292 | 1.00[AFR][1000 genomes] |
| rs73735296 | 1.00[AFR][1000 genomes] |
| rs73735300 | 1.00[AFR][1000 genomes] |
| rs73737803 | 1.00[AFR][1000 genomes] |
| rs73737805 | 1.00[AFR][1000 genomes] |
| rs73737807 | 1.00[AFR][1000 genomes] |
| rs73737811 | 1.00[AFR][1000 genomes] |
| rs73737812 | 1.00[AFR][1000 genomes] |
| rs73737813 | 1.00[AFR][1000 genomes] |
| rs73737819 | 1.00[AFR][1000 genomes] |
| rs73737822 | 1.00[AFR][1000 genomes] |
| rs73737825 | 1.00[AFR][1000 genomes] |
| rs73737828 | 1.00[AFR][1000 genomes] |
| rs73737830 | 1.00[AFR][1000 genomes] |
| rs73737833 | 1.00[AFR][1000 genomes] |
| rs73737834 | 1.00[AFR][1000 genomes] |
| rs73737835 | 1.00[AFR][1000 genomes] |
| rs73737851 | 1.00[AFR][1000 genomes] |
| rs73737859 | 1.00[AFR][1000 genomes] |
| rs73737860 | 1.00[AFR][1000 genomes] |
| rs73737862 | 1.00[AFR][1000 genomes] |
| rs73737863 | 1.00[AFR][1000 genomes] |
| rs73737864 | 1.00[AFR][1000 genomes] |
| rs73737865 | 1.00[AFR][1000 genomes] |
| rs73737869 | 1.00[AFR][1000 genomes] |
| No data |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr6:44798400-44822800 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 2 | chr6:44808600-44821000 | Weak transcription | Primary T cells from cord blood | blood |
| 3 | chr6:44813400-44817200 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
