Variant report

Variant	rs16873210
Chromosome Location	chr5:35250026-35250027
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 16 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:16)

rs_ID	r²[population]
rs10512631	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16873191	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16873529	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16873766	0.91[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs17438666	0.85[EUR][1000 genomes]
rs17585046	0.85[EUR][1000 genomes]
rs17585060	0.85[EUR][1000 genomes]
rs26196	0.85[EUR][1000 genomes]
rs56967971	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs58975450	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs59862556	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs61687847	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73087009	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73087012	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73087013	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs73087019	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]

No data

Chromatin state (count:6 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35249400-35250200	Active TSS	Monocytes-CD14+_RO01746	blood
2	chr5:35249600-35250400	Enhancers	iPS-20b Cell Line	embryonic stem cell
3	chr5:35249600-35250800	Enhancers	iPS-18 Cell Line	embryonic stem cell
4	chr5:35249800-35250200	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
5	chr5:35250000-35250200	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
6	chr5:35250000-35251000	Enhancers	Dnd41	blood

Quick Search:

Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

what's new

Quick links