Variant report

No.	Distal block	Cell Line	Cell type
1	chr5:35273782..35276112-chr5:35309068..35310814,2	MCF-7	breast:
2	chr5:35307098..35309352-chr5:35310919..35312593,2	MCF-7	breast:
3	chr5:35227956..35231648-chr5:35306596..35309604,5	MCF-7	breast:
4	chr5:35227369..35231547-chr5:35305880..35313483,7	MCF-7	breast:

Variant related genes	Relation type
ENSG00000113494	Chromatin interaction

rSNPs within LD-proxies of this variant (count:23)

rs_ID	r²[population]
rs10512631	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16873191	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16873210	0.84[AMR][1000 genomes];0.92[EUR][1000 genomes]
rs16873529	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16873766	0.92[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17438666	0.92[EUR][1000 genomes]
rs17585046	0.92[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs17585060	0.92[EUR][1000 genomes]
rs26196	0.92[EUR][1000 genomes]
rs56967971	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs58975450	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs59862556	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs61687847	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.92[ASN][1000 genomes]
rs73075798	0.93[AMR][1000 genomes];1.00[ASN][1000 genomes]
rs73087009	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73087012	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73087013	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73087020	0.89[AFR][1000 genomes]
rs73087022	0.89[AFR][1000 genomes]
rs73087024	0.89[AFR][1000 genomes]
rs73087031	1.00[AFR][1000 genomes]
rs73087035	1.00[AFR][1000 genomes]
rs73087037	1.00[AFR][1000 genomes]

No data

Chromatin state (count:14 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr5:35308200-35309400	Enhancers	Cortex derived primary cultured neurospheres	brain
2	chr5:35308200-35310400	Enhancers	Fetal Brain Female	brain
3	chr5:35308600-35309600	Enhancers	Foreskin Keratinocyte Primary Cells skin02	Skin
4	chr5:35308600-35310200	Enhancers	Foreskin Keratinocyte Primary Cells skin03	Skin
5	chr5:35308600-35310400	Enhancers	Foreskin Melanocyte Primary Cells skin03	Skin
6	chr5:35308800-35309400	Enhancers	iPS-18 Cell Line	embryonic stem cell
7	chr5:35308800-35310000	Enhancers	Adipose Derived Mesenchymal Stem Cell Cultured Cells	ES cell derived
8	chr5:35308800-35310000	Weak transcription	Brain Germinal Matrix	brain
9	chr5:35309000-35309800	Weak transcription	Fetal Adrenal Gland	Adrenal Gland
10	chr5:35309000-35310000	Weak transcription	Fetal Brain Male	brain
11	chr5:35309000-35310000	Weak transcription	Pancreas	Pancrea
12	chr5:35309000-35311200	Weak transcription	Monocytes-CD14+_RO01746	blood
13	chr5:35309200-35310400	Weak transcription	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
14	chr5:35309200-35310400	Weak transcription	ES-UCSF4 Cell Line	embryonic stem cell

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