Variant report

Variant	rs16891405
Chromosome Location	chr6:26204506-26204507
allele	A/G
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

TF binding
region (count:343)
CpG islands
(count:61)
Chromatin interactive
region (count:41)
LncRNA
region (count:0)
Mature miRNA
region (count: 0)
miRNA target
sites (count:0)

(count:343 , 50 per page) page: 1 2 3 4 5 6 7

No.	Transcrition factor	Chromosome Location	Cell Line	Cell type	Cell Stage	Matched TF binding sites
1	MEF2A	chr6:26204393-26205161	K562	blood:	n/a	n/a
2	ATF3	chr6:26204449-26205027	A549	lung:	n/a	chr6:26204704-26204717 chr6:26204707-26204715 chr6:26204705-26204716 chr6:26204706-26204717 chr6:26204705-26204718 chr6:26204707-26204717 chr6:26204706-26204714 chr6:26204705-26204716 chr6:26204703-26204714 chr6:26204707-26204714 chr6:26204704-26204714 chr6:26204703-26204718 chr6:26204704-26204717 chr6:26204707-26204718
3	POLR2A	chr6:26204448-26206415	ProgFib	skin:	n/a	n/a
4	ELF1	chr6:26204333-26205261	HepG2	liver:	n/a	n/a
5	EP300	chr6:26204486-26205077	T-47D	breast:	n/a	chr6:26204627-26204636
6	POLR2A	chr6:26204434-26204525	A549	lung:	n/a	n/a
7	POLR2A	chr6:26204440-26206771	GM12878	blood:	n/a	n/a
8	JUN	chr6:26204485-26205121	K562	blood:	n/a	chr6:26204705-26204718 chr6:26204706-26204715
9	POLR2A	chr6:26204337-26206980	PANC-1	pancreas:	n/a	n/a
10	NFIC	chr6:26204308-26206042	HepG2	liver:	n/a	n/a
11	POLR2A	chr6:26204477-26206766	GM12892	blood:	n/a	n/a
12	POLR2A	chr6:26203000-26208312	H1-hESC	embryonic stem cell:	n/a	n/a
13	CREB1	chr6:26204208-26206832	K562	blood:	n/a	chr6:26204704-26204717
14	POLR2A	chr6:26187684-26208312	K562	blood:	n/a	n/a
15	MAX	chr6:26204481-26205350	ECC-1	luminal epithelium:	n/a	n/a
16	POLR2A	chr6:26203926-26207116	K562	blood:	n/a	n/a
17	EP300	chr6:26204489-26205200	MCF-7	breast:	n/a	chr6:26204627-26204636
18	ELK1	chr6:26204481-26205931	GM12878	blood:	n/a	n/a
19	CTCF	chr6:26204500-26204650	HEK293	kidney:	n/a	n/a
20	MAFK	chr6:26204364-26206437	K562	blood:	n/a	n/a
21	MAX	chr6:26204254-26205299	MCF-7	breast:	n/a	n/a
22	POLR2A	chr6:26204449-26206755	HUVEC	blood vessel:	n/a	n/a
23	RELA	chr6:26204495-26206086	GM15510	blood:	n/a	n/a
24	NFIC	chr6:26204341-26206624	SK-N-SH	brain:	n/a	n/a
25	POLR2A	chr6:26204469-26205854	MCF-7	breast:	n/a	n/a
26	YY1	chr6:26204461-26206517	SK-N-SH_RA	brain:	n/a	n/a
27	POLR2A	chr6:26204397-26206546	U87	brain:	n/a	n/a
28	EP300	chr6:26204322-26205329	SK-N-SH	brain:	n/a	chr6:26204627-26204636
29	CTCF	chr6:26204480-26204630	HCT-116	colon:	n/a	n/a
30	POLR2A	chr6:26204281-26206507	HepG2	liver:	n/a	n/a
31	MAX	chr6:26204396-26205239	SK-N-SH	brain:	n/a	n/a
32	CREB1	chr6:26204429-26205119	ECC-1	luminal epithelium:	n/a	chr6:26204704-26204717
33	SIN3AK20	chr6:26204366-26206463	HCT-116	colon:	n/a	n/a
34	SIN3AK20	chr6:26204454-26205360	PANC-1	pancreas:	n/a	n/a
35	POLR2A	chr6:26204392-26206630	K562	blood:	n/a	n/a
36	MYBL2	chr6:26204160-26205923	HepG2	liver:	n/a	n/a
37	CHD2	chr6:26204411-26205169	HepG2	liver:	n/a	n/a
38	UBTF	chr6:26204038-26205817	K562	blood:	n/a	n/a
39	JUND	chr6:26204416-26205160	MCF-7	breast:	n/a	chr6:26204706-26204715
40	MTA3	chr6:26204284-26206481	GM12878	blood:	n/a	n/a
41	FOS	chr6:26204462-26205718	HUVEC	blood vessel:	n/a	chr6:26204706-26204715
42	FOSL2	chr6:26204499-26205168	HepG2	liver:	n/a	chr6:26204706-26204715
43	POLR2A	chr6:26204303-26206821	Hela-S3	cervix:	n/a	n/a
44	MAX	chr6:26204498-26205558	HepG2	liver:	n/a	n/a
45	POLR2A	chr6:26204289-26204543	SK-N-SH	brain:	n/a	n/a
46	POLR2A	chr6:26204419-26206904	GM12878	blood:	n/a	n/a
47	POLR2A	chr6:26204464-26206494	HepG2	liver:	n/a	n/a
48	TAF1	chr6:26204369-26205244	H1-neurons	neurons:	n/a	n/a
49	HEY1	chr6:26204381-26206287	HepG2	liver:	n/a	chr6:26204707-26204716 chr6:26204705-26204714
50	POLR2A	chr6:26204464-26206432	HL-60	blood:	n/a	n/a

(count:61 , 50 per page) page: 1 2

No.	Chromosome Location	Cell Line	Cell type	Cell Stage
1	chr6:26204463-26204513	NB4	blood:	n/a
2	chr6:26204463-26204513	SKMC	muscle:	n/a
3	chr6:26204463-26204513	AG04450	lung:	fetal
4	chr6:26204463-26204513	GM06990	blood:	n/a
5	chr6:26204463-26204513	Caco-2	colon:	n/a
6	chr6:26204463-26204513	Hepatocyte	liver:	n/a
7	chr6:26204463-26204513	NT2-D1	testis:	n/a
8	chr6:26204463-26204513	HAEpiC	amniotic membrane:	n/a
9	chr6:26204463-26204513	HNPCEpiC	eye:	n/a
10	chr6:26204463-26204513	HEEpiC	esophagus:	n/a
11	chr6:26204463-26204513	PrEC	prostate:	n/a
12	chr6:26204463-26204513	U87	brain:	n/a
13	chr6:26204463-26204513	HCT-116	colon:	n/a
14	chr6:26204463-26204513	RPTEC	kidney:	n/a
15	chr6:26204463-26204513	GM19239	blood:	n/a
16	chr6:26204463-26204513	AG04449	skin:	fetal
17	chr6:26204463-26204513	K562	blood:	n/a
18	chr6:26204463-26204513	AG09319	gingival:	n/a
19	chr6:26204463-26204513	H1-hESC	embryonic stem cell:	embryo
20	chr6:26204463-26204513	SK-N-SH_RA	brain:	n/a
21	chr6:26204463-26204513	IMR90	lung:	fetal
22	chr6:26204463-26204513	HCF	heart:	n/a
23	chr6:26204463-26204513	HPAEpiC	pulmonary alveolar:	n/a
24	chr6:26204463-26204513	ECC-1	luminal epithelium:	n/a
25	chr6:26204463-26204513	HUVEC	blood vessel:	n/a
26	chr6:26204463-26204513	CMK	blood:	n/a
27	chr6:26204463-26204513	NHDF-neo	bronchial:	n/a
28	chr6:26204463-26204513	HL-60	blood:	n/a
29	chr6:26204463-26204513	PANC-1	pancreas:	n/a
30	chr6:26204463-26204513	PFSK-1	brain:	n/a
31	chr6:26204463-26204513	HepG2	liver:	n/a
32	chr6:26204463-26204513	NHBE	bronchial:	n/a
33	chr6:26204463-26204513	GM12891	blood:	n/a
34	chr6:26204463-26204513	MCF-7	breast:	n/a
35	chr6:26204463-26204513	SAEC	small airway:	n/a
36	chr6:26204463-26204513	MCF10A-Er-Src	breast:	n/a
37	chr6:26204463-26204513	HEK293	kidney:	embryo
38	chr6:26204463-26204513	HRCEpiC	kidney:	n/a
39	chr6:26204463-26204513	HCM	heart:	n/a
40	chr6:26204463-26204513	SK-N-SH	brain:	n/a
41	chr6:26204463-26204513	LNCaP	prostate:	n/a
42	chr6:26204463-26204513	NH-A	brain:	n/a
43	chr6:26204463-26204513	ProgFib	skin:	n/a
44	chr6:26204463-26204513	HRPEpiC	eye:	n/a
45	chr6:26204463-26204513	HCPEpiC	choroid plexus:	n/a
46	chr6:26204463-26204513	Hela-S3	cervix:	n/a
47	chr6:26204463-26204513	Jurkat	blood:	n/a
48	chr6:26204463-26204513	T-47D	breast:	n/a
49	chr6:26204463-26204513	SK-N-MC	brain:	n/a
50	chr6:26204463-26204513	BE2_C	brain:	n/a

(count:41 , 50 per page) page: 1

No.	Distal block	Cell Line	Cell type
1	chr6:26203350..26205090-chr6:27099738..27102062,2	MCF-7	breast:
2	chr6:26204334..26206803-chr8:99304596..99307549,2	MCF-7	breast:
3	chr15:66678789..66679511-chr6:26204403..26205285,2	Hela-S3	cervix:
4	chr6:26203848..26208105-chr6:27113189..27116345,6	MCF-7	breast:
5	chr11:62608806..62609617-chr6:26204391..26205134,2	HCT-116	colon:
6	chr6:26026421..26028789-chr6:26203336..26205903,2	MCF-7	breast:
7	chr15:74988155..74989009-chr6:26204371..26204932,2	Hela-S3	cervix:
8	chr6:26019231..26022068-chr6:26204049..26206272,3	MCF-7	breast:
9	chr6:26201617..26205446-chr6:27775076..27778001,4	K562	blood:
10	chr5:140998035..140998908-chr6:26204442..26205326,2	Hela-S3	cervix:
11	chr6:26204453..26205159-chr6:30034223..30034802,2	Hela-S3	cervix:
12	chr6:16238757..16240656-chr6:26203889..26205752,2	K562	blood:
13	chr21:43784816..43787637-chr6:26203618..26206285,2	MCF-7	breast:
14	chr6:26196890..26209578-chr6:27096615..27108451,46	K562	blood:
15	chr6:26202461..26206307-chr6:27111685..27116147,8	K562	blood:
16	chr6:26203030..26208239-chr6:27858574..27863151,12	MCF-7	breast:
17	chr6:26204417..26205145-chrX:11129192..11129872,2	Hela-S3	cervix:
18	chr6:26203154..26204718-chr6:26537605..26540398,2	K562	blood:
19	chr20:52824540..52826280-chr6:26204006..26206221,2	MCF-7	breast:
20	chr1:25573431..25574212-chr6:26204345..26205221,2	Hela-S3	cervix:
21	chr20:18486697..18489391-chr6:26203870..26205427,2	MCF-7	breast:
22	chr2:238394029..238396506-chr6:26203344..26206529,3	MCF-7	breast:
23	chr6:26195729..26208268-chr6:27092660..27105612,50	K562	blood:
24	chr17:41463769..41466376-chr6:26204076..26206322,2	K562	blood:
25	chr6:26203843..26208171-chr6:27113293..27116172,4	MCF-7	breast:
26	chr6:26204316..26204929-chr8:144416563..144417284,2	Hela-S3	cervix:
27	chr1:149856931..149859975-chr6:26202139..26205611,5	MCF-7	breast:
28	chr6:26202344..26207712-chr6:27112121..27116672,11	K562	blood:
29	chr6:26203687..26207464-chr6:26521178..26524047,5	K562	blood:
30	chr6:26200995..26208208-chr6:27098278..27102268,10	MCF-7	breast:
31	chr17:63051178..63053985-chr6:26202995..26205801,2	MCF-7	breast:
32	chr6:26204311..26207640-chr6:27105695..27109383,4	K562	blood:
33	chr6:26201927..26205994-chr6:27859683..27862837,3	K562	blood:
34	chr6:26203034..26206484-chr6:27789284..27793104,6	MCF-7	breast:
35	chr20:52772678..52774287-chr6:26204337..26206417,2	MCF-7	breast:
36	chr6:26203418..26208290-chr6:27773529..27778557,7	MCF-7	breast:
37	chr6:26197916..26207803-chr6:27772547..27779655,13	K562	blood:
38	chr6:26027102..26027646-chr6:26204411..26204913,2	Hela-S3	cervix:
39	chr6:26204474..26205349-chr6:26285399..26286292,4	Hela-S3	cervix:
40	chr6:26031804..26034805-chr6:26202147..26206144,5	MCF-7	breast:
41	chr6:26202930..26204758-chr6:27804795..27807799,3	K562	blood:

No data

Variant related genes	Relation type
HIST1H3D	TF binding region
HIST1H4E	TF binding region
HIST1H3D	CpG island
HIST1H4E	CpG island
ENSG00000169032	Chromatin interaction
ENSG00000197153	Chromatin interaction
ENSG00000196747	Chromatin interaction
ENSG00000197238	Chromatin interaction
ENSG00000137259	Chromatin interaction
ENSG00000137198	Chromatin interaction
ENSG00000197903	Chromatin interaction
ENSG00000160182	Chromatin interaction
ENSG00000217862	Chromatin interaction
ENSG00000124529	Chromatin interaction
ENSG00000196176	Chromatin interaction
ENSG00000104361	Chromatin interaction
ENSG00000233822	Chromatin interaction
ENSG00000185130	Chromatin interaction
ENSG00000124693	Chromatin interaction
ENSG00000198366	Chromatin interaction
ENSG00000133316	Chromatin interaction
ENSG00000101132	Chromatin interaction
ENSG00000196331	Chromatin interaction
ENSG00000184428	Chromatin interaction
ENSG00000184260	Chromatin interaction
ENSG00000184348	Chromatin interaction
ENSG00000198339	Chromatin interaction
ENSG00000178096	Chromatin interaction
ENSG00000184825	Chromatin interaction
ENSG00000265565	Chromatin interaction
ENSG00000101310	Chromatin interaction
ENSG00000120063	Chromatin interaction
ENSG00000204619	Chromatin interaction
ENSG00000124635	Chromatin interaction
ENSG00000019186	Chromatin interaction
ENSG00000196787	Chromatin interaction
ENSG00000117616	Chromatin interaction
ENSG00000004961	Chromatin interaction
ENSG00000233224	Chromatin interaction
ENSG00000184678	Chromatin interaction
ENSG00000179151	Chromatin interaction
ENSG00000203813	Chromatin interaction
ENSG00000228223	Chromatin interaction
ENSG00000131504	Chromatin interaction
ENSG00000184270	Chromatin interaction
ENSG00000158406	Chromatin interaction
ENSG00000182952	Chromatin interaction
ENSG00000234129	Chromatin interaction
ENSG00000115648	Chromatin interaction
ENSG00000075131	Chromatin interaction
ENSG00000188825	Chromatin interaction

Extended variants
information (count: 64 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:44)

rs_ID	r²[population]
rs10452600	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs10484436	0.85[AFR][1000 genomes];0.87[AMR][1000 genomes];0.87[EUR][1000 genomes]
rs11753131	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11753625	0.95[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs11753655	0.91[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11754744	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11755210	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11755943	0.86[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11757394	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs11757754	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs11758351	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];0.98[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs11759904	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs1341759	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891378	0.87[AMR][1000 genomes];0.96[EUR][1000 genomes];0.82[ASN][1000 genomes]
rs16891397	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891401	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs16891443	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16891446	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16891455	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16891456	0.86[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16891466	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs16891467	0.83[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs17598927	0.93[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs1997768	0.84[AFR][1000 genomes];0.98[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2022448	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2050948	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2050950	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2069018	0.93[AFR][1000 genomes];0.93[AMR][1000 genomes];0.92[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2069019	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2069020	0.93[AFR][1000 genomes];0.96[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2143345	0.86[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs2143346	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs2143347	0.83[AMR][1000 genomes];0.97[EUR][1000 genomes];0.98[ASN][1000 genomes]
rs2183948	0.85[AMR][1000 genomes];0.94[EUR][1000 genomes]
rs3757135	0.91[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41266801	0.91[AMR][1000 genomes];0.97[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs41266807	0.81[AFR][1000 genomes];0.96[AMR][1000 genomes];0.98[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55643278	0.85[AFR][1000 genomes];0.89[AMR][1000 genomes];0.86[EUR][1000 genomes]
rs55815656	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs55848726	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs56186759	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs56220351	0.99[AFR][1000 genomes];1.00[AMR][1000 genomes];0.95[EUR][1000 genomes];0.96[ASN][1000 genomes]
rs56398712	0.85[AFR][1000 genomes];0.93[AMR][1000 genomes];0.89[EUR][1000 genomes]
rs67575965	0.81[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:20 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv1029920	chr6:25638507-26585842	Bivalent/Poised TSS Flanking Active TSS ZNF genes & repeats Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Active TSS Genic enhancers Strong transcription Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
2	nsv538162	chr6:25638507-26585842	Flanking Active TSS Active TSS ZNF genes & repeats Genic enhancers Weak transcription Strong transcription Enhancers Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent/Poised TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1215 gene(s)	inside rSNPs	diseases
3	nsv1030351	chr6:25813178-26352046	Enhancers Active TSS Weak transcription Flanking Active TSS Bivalent/Poised TSS Bivalent Enhancer Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Strong transcription ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1189 gene(s)	inside rSNPs	diseases
4	nsv1023453	chr6:25853830-26528250	Weak transcription Flanking Active TSS Enhancers Active TSS Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Transcr. at gene 5' and 3' ZNF genes & repeats Flanking Bivalent TSS/Enh	TF binding region CpG island Chromatin interactive region lncRNA miRNA target site	1201 gene(s)	inside rSNPs	diseases
5	nsv1025237	chr6:25874326-26280867	Flanking Active TSS Active TSS Enhancers Weak transcription Bivalent/Poised TSS Strong transcription Genic enhancers ZNF genes & repeats Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
6	nsv538163	chr6:25874326-26280867	Enhancers Flanking Active TSS Strong transcription Active TSS Weak transcription Genic enhancers Bivalent/Poised TSS Transcr. at gene 5' and 3' Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1166 gene(s)	inside rSNPs	diseases
7	nsv428137	chr6:25987413-26351920	Enhancers Flanking Active TSS Active TSS Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS Bivalent Enhancer Genic enhancers Strong transcription ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1181 gene(s)	inside rSNPs	diseases
8	nsv916992	chr6:25991630-26280921	Active TSS Weak transcription Enhancers Flanking Active TSS Genic enhancers Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' ZNF genes & repeats Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1159 gene(s)	inside rSNPs	diseases
9	nsv1028232	chr6:26005449-26319756	Flanking Active TSS Genic enhancers Active TSS Bivalent/Poised TSS Weak transcription Enhancers Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1171 gene(s)	inside rSNPs	diseases
10	nsv870314	chr6:26008435-26280807	Flanking Active TSS Enhancers Active TSS Genic enhancers Weak transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	1151 gene(s)	inside rSNPs	diseases
11	nsv1023457	chr6:26014014-26305407	Active TSS Enhancers Flanking Active TSS Transcr. at gene 5' and 3' Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Genic enhancers Bivalent Enhancer ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1170 gene(s)	inside rSNPs	diseases
12	nsv1025493	chr6:26026870-26223838	Weak transcription Enhancers Flanking Active TSS Active TSS Flanking Bivalent TSS/Enh Bivalent/Poised TSS Strong transcription Bivalent Enhancer Genic enhancers Transcr. at gene 5' and 3' ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1001 gene(s)	inside rSNPs	diseases
13	nsv1023979	chr6:26026870-26287399	Flanking Active TSS Enhancers Bivalent/Poised TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Strong transcription Genic enhancers ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1113 gene(s)	inside rSNPs	diseases
14	nsv1015782	chr6:26026870-26323895	Active TSS Weak transcription Flanking Active TSS Enhancers Strong transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Flanking Bivalent TSS/Enh Bivalent Enhancer Genic enhancers ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	1114 gene(s)	inside rSNPs	diseases
15	nsv1018665	chr6:26026870-26352046	Flanking Active TSS Weak transcription Active TSS Enhancers Strong transcription Transcr. at gene 5' and 3' Bivalent Enhancer ZNF genes & repeats Flanking Bivalent TSS/Enh Bivalent/Poised TSS Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	1116 gene(s)	inside rSNPs	diseases
16	nsv482348	chr6:26082709-26261136	Enhancers Flanking Active TSS Active TSS Weak transcription Transcr. at gene 5' and 3' Bivalent/Poised TSS Strong transcription Genic enhancers Bivalent Enhancer Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	799 gene(s)	inside rSNPs	diseases
17	nsv518431	chr6:26148311-26211368	Active TSS Flanking Active TSS Weak transcription Enhancers Bivalent Enhancer Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription Genic enhancers Flanking Bivalent TSS/Enh ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	521 gene(s)	inside rSNPs	diseases
18	nsv526456	chr6:26148311-26211368	Active TSS Enhancers Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Bivalent/Poised TSS Transcr. at gene 5' and 3' Strong transcription ZNF genes & repeats Genic enhancers Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	521 gene(s)	inside rSNPs	diseases
19	nsv883490	chr6:26172219-26231608	Enhancers Flanking Active TSS Active TSS Weak transcription ZNF genes & repeats Bivalent/Poised TSS Transcr. at gene 5' and 3' Genic enhancers Flanking Bivalent TSS/Enh Bivalent Enhancer Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	316 gene(s)	inside rSNPs	diseases
20	nsv1021294	chr6:26190316-26246784	Active TSS Flanking Active TSS Enhancers Weak transcription Flanking Bivalent TSS/Enh Transcr. at gene 5' and 3' Bivalent/Poised TSS ZNF genes & repeats Strong transcription Bivalent Enhancer Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	309 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:124 , 50 per page) page: 1 2 3

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr6:26203400-26206400	Active TSS	HUES6 Cell Line	embryonic stem cell
2	chr6:26203400-26207200	Active TSS	ES-I3 Cell Line	embryonic stem cell
3	chr6:26203400-26207600	Active TSS	Thymus	Thymus
4	chr6:26203400-26207800	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Male	--
5	chr6:26203600-26205200	Active TSS	hESC Derived CD56+ Mesoderm Cultured Cells	ES cell derived
6	chr6:26203600-26206400	Active TSS	K562	blood
7	chr6:26203600-26207000	Active TSS	H9 Cell Line	embryonic stem cell
8	chr6:26203800-26204600	Flanking Active TSS	Primary hematopoietic stem cells G-CSF-mobilized Female	--
9	chr6:26203800-26205000	Active TSS	Brain Germinal Matrix	brain
10	chr6:26203800-26207000	Active TSS	hESC Derived CD184+ Endoderm Cultured Cells	ES cell derived
11	chr6:26203800-26207000	Active TSS	iPS-18 Cell Line	embryonic stem cell
12	chr6:26203800-26207000	Active TSS	Fetal Kidney	kidney
13	chr6:26203800-26207200	Active TSS	HUES48 Cell Line	embryonic stem cell
14	chr6:26203800-26207200	Active TSS	Foreskin Fibroblast Primary Cells skin01	Skin
15	chr6:26203800-26207600	Active TSS	H1 Cell Line	embryonic stem cell
16	chr6:26203800-26207600	Active TSS	HUES64 Cell Line	embryonic stem cell
17	chr6:26204000-26204600	Flanking Active TSS	Primary hematopoietic stem cells short term culture	blood
18	chr6:26204000-26204600	Flanking Active TSS	Cortex derived primary cultured neurospheres	brain
19	chr6:26204000-26204600	Flanking Active TSS	Ganglion Eminence derived primary cultured neurospheres	brain
20	chr6:26204000-26204600	Flanking Active TSS	Fetal Muscle Leg	muscle
21	chr6:26204000-26204600	Flanking Active TSS	Fetal Thymus	thymus
22	chr6:26204000-26204600	Flanking Active TSS	Dnd41	blood
23	chr6:26204000-26204600	Flanking Active TSS	HUVEC	blood vessel
24	chr6:26204000-26204600	Flanking Active TSS	Monocytes-CD14+_RO01746	blood
25	chr6:26204000-26204800	Active TSS	Foreskin Melanocyte Primary Cells skin01	Skin
26	chr6:26204000-26205000	Active TSS	H1 BMP4 Derived Trophoblast Cultured Cells	ES cell derived
27	chr6:26204000-26205800	Active TSS	Foreskin Melanocyte Primary Cells skin03	Skin
28	chr6:26204000-26205800	Active TSS	Osteobl	bone
29	chr6:26204000-26206600	Active TSS	Brain Angular Gyrus	brain
30	chr6:26204000-26206600	Active TSS	Colon Smooth Muscle	Colon
31	chr6:26204000-26206600	Bivalent/Poised TSS	Psoas Muscle	Psoas
32	chr6:26204000-26206800	Active TSS	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
33	chr6:26204000-26206800	Active TSS	iPS DF 6.9 Cell Line	embryonic stem cell
34	chr6:26204000-26206800	Active TSS	iPS DF 19.11 Cell Line	embryonic stem cell
35	chr6:26204000-26206800	Active TSS	ES-UCSF4 Cell Line	embryonic stem cell
36	chr6:26204000-26206800	Active TSS	Right Ventricle	heart
37	chr6:26204000-26206800	Bivalent/Poised TSS	Stomach Smooth Muscle	stomach
38	chr6:26204000-26207000	Active TSS	IMR90 fetal lung fibroblasts Cell Line	lung
39	chr6:26204000-26207000	Active TSS	iPS-15b Cell Line	embryonic stem cell
40	chr6:26204000-26207200	Active TSS	iPS-20b Cell Line	embryonic stem cell
41	chr6:26204000-26207200	Active TSS	Brain Inferior Temporal Lobe	brain
42	chr6:26204000-26207200	Active TSS	Rectal Mucosa Donor 29	rectum
43	chr6:26204000-26207200	Active TSS	NH-A	brain
44	chr6:26204000-26207800	Active TSS	Brain Anterior Caudate	brain
45	chr6:26204200-26204600	Flanking Active TSS	Breast Myoepithelial Primary Cells	Breast
46	chr6:26204200-26204600	Flanking Active TSS	Primary monocytes fromperipheralblood	blood
47	chr6:26204200-26204600	Flanking Active TSS	Primary B cells from peripheral blood	blood
48	chr6:26204200-26204600	Flanking Active TSS	Primary hematopoietic stem cells	blood
49	chr6:26204200-26204600	Flanking Active TSS	Primary T helper memory cells from peripheral blood 2	blood
50	chr6:26204200-26204600	Flanking Active TSS	Primary T helper naive cells from peripheral blood	blood

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