Variant report

Variant rs2022448
Chromosome Location chr6:26207928-26207929
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:48 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr6:26205800-26208000 Flanking Active TSS Primary T cells from cord blood blood
2 chr6:26206200-26208000 Flanking Active TSS H9 Derived Neuron Cultured Cells ES cell derived
3 chr6:26206800-26208000 Enhancers Primary T helper naive cells from peripheral blood blood
4 chr6:26206800-26208000 Enhancers Primary T killer memory cells from peripheral blood blood
5 chr6:26206800-26208000 Enhancers Liver Liver
6 chr6:26206800-26208200 Enhancers Primary T helper cells PMA-I stimulated --
7 chr6:26206800-26215200 Weak transcription Right Atrium heart
8 chr6:26207000-26208000 Enhancers iPS-15b Cell Line embryonic stem cell
9 chr6:26207000-26208000 Enhancers Primary T helper naive cells fromperipheralblood blood
10 chr6:26207000-26208200 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
11 chr6:26207000-26210400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
12 chr6:26207000-26213200 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
13 chr6:26207000-26215400 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
14 chr6:26207200-26208000 Enhancers Primary B cells from cord blood blood
15 chr6:26207200-26208000 Enhancers Primary hematopoietic stem cells short term culture blood
16 chr6:26207200-26208000 Weak transcription Fetal Adrenal Gland Adrenal Gland
17 chr6:26207200-26208000 Enhancers Fetal Intestine Small intestine
18 chr6:26207200-26208200 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
19 chr6:26207200-26208200 Enhancers Primary hematopoietic stem cells blood
20 chr6:26207200-26208200 Enhancers Primary T helper memory cells from peripheral blood 2 blood
21 chr6:26207400-26208000 Enhancers HUES48 Cell Line embryonic stem cell
22 chr6:26207400-26208000 Enhancers iPS-20b Cell Line embryonic stem cell
23 chr6:26207400-26208000 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr6:26207400-26208000 Enhancers Fetal Brain Male brain
25 chr6:26207400-26208000 Flanking Active TSS Fetal Kidney kidney
26 chr6:26207400-26208000 Enhancers A549 lung
27 chr6:26207400-26208200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr6:26207400-26208200 Enhancers Brain Cingulate Gyrus brain
29 chr6:26207400-26208200 Enhancers Brain Inferior Temporal Lobe brain
30 chr6:26207400-26208800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
31 chr6:26207400-26214000 Weak transcription ES-I3 Cell Line embryonic stem cell
32 chr6:26207600-26208000 Enhancers H1 Cell Line embryonic stem cell
33 chr6:26207600-26208000 Flanking Active TSS Brain Angular Gyrus brain
34 chr6:26207600-26208000 Flanking Active TSS Thymus Thymus
35 chr6:26207600-26208000 Enhancers GM12878-XiMat blood
36 chr6:26207600-26208200 Enhancers H9 Cell Line embryonic stem cell
37 chr6:26207600-26208200 Enhancers iPS-18 Cell Line embryonic stem cell
38 chr6:26207800-26208000 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
39 chr6:26207800-26208000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
40 chr6:26207800-26208000 Enhancers Brain Hippocampus Middle brain
41 chr6:26207800-26208000 Enhancers Brain Substantia Nigra brain
42 chr6:26207800-26208200 Flanking Active TSS Brain Germinal Matrix brain
43 chr6:26207800-26208200 Transcr. at gene 5' and 3' K562 blood
44 chr6:26207800-26208800 Enhancers Dnd41 blood
45 chr6:26207800-26209000 Enhancers Fetal Thymus thymus
46 chr6:26207800-26214000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr6:26207800-26214800 Weak transcription HUES64 Cell Line embryonic stem cell
48 chr6:26207800-26215000 Weak transcription Primary T helper cells fromperipheralblood blood

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