The 2.0 version of rSNPBase

Variant report

Variant rs16897633
Chromosome Location chr8:123927003-123927004
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:85 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:123889200-123931200 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
2 chr8:123897200-123928200 Weak transcription Spleen Spleen
3 chr8:123900400-123928200 Weak transcription Pancreas Pancrea
4 chr8:123904400-123931200 Weak transcription Rectal Smooth Muscle rectum
5 chr8:123906400-123928200 Weak transcription Aorta Aorta
6 chr8:123908400-123929200 Weak transcription HSMMtube muscle
7 chr8:123914000-123927600 Weak transcription iPS-18 Cell Line embryonic stem cell
8 chr8:123914000-123931200 Weak transcription Rectal Mucosa Donor 31 rectum
9 chr8:123914000-123963400 Weak transcription Sigmoid Colon Sigmoid Colon
10 chr8:123914600-123931200 Weak transcription Rectal Mucosa Donor 29 rectum
11 chr8:123916800-123931200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
12 chr8:123916800-123963600 Weak transcription Fetal Intestine Large intestine
13 chr8:123917000-123930400 Weak transcription Primary T helper cells fromperipheralblood blood
14 chr8:123917000-123930600 Weak transcription Primary T regulatory cells fromperipheralblood blood
15 chr8:123917800-123929600 Weak transcription Primary T helper cells PMA-I stimulated --
16 chr8:123918000-123930800 Weak transcription Primary hematopoietic stem cells blood
17 chr8:123918200-123927800 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
18 chr8:123918200-123930600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
19 chr8:123918200-123963800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
20 chr8:123919000-123930000 Weak transcription Stomach Smooth Muscle stomach
21 chr8:123920400-123927600 Weak transcription iPS-20b Cell Line embryonic stem cell
22 chr8:123920400-123927800 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr8:123920800-123930200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
24 chr8:123921600-123929600 Strong transcription Primary T cells from cord blood blood
25 chr8:123922200-123927200 Weak transcription H9 Cell Line embryonic stem cell
26 chr8:123922200-123930200 Weak transcription Primary T killer memory cells from peripheral blood blood
27 chr8:123922600-123929400 Weak transcription Primary T helper naive cells from peripheral blood blood
28 chr8:123922800-123927200 Weak transcription HUES6 Cell Line embryonic stem cell
29 chr8:123922800-123927800 Weak transcription H1 Cell Line embryonic stem cell
30 chr8:123922800-123928200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
31 chr8:123922800-123928200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
32 chr8:123922800-123928200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr8:123922800-123928400 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
34 chr8:123922800-123938800 Weak transcription Fetal Kidney kidney
35 chr8:123922800-123943600 Weak transcription Fetal Adrenal Gland Adrenal Gland
36 chr8:123923000-123927800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
37 chr8:123923000-123928000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
38 chr8:123923000-123929000 Weak transcription GM12878-XiMat blood
39 chr8:123923000-123929600 Weak transcription Primary T killer naive cells fromperipheralblood blood
40 chr8:123923000-123931000 Weak transcription Lung lung
41 chr8:123923200-123928000 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
42 chr8:123923400-123927400 Strong transcription Primary B cells from peripheral blood blood
43 chr8:123923400-123928000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
44 chr8:123923400-123928800 Weak transcription NHEK skin
45 chr8:123923400-123929200 Weak transcription Primary T helper naive cells fromperipheralblood blood
46 chr8:123923600-123928200 Weak transcription Fetal Lung lung
47 chr8:123923600-123929000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
48 chr8:123923800-123927800 Weak transcription Primary monocytes fromperipheralblood blood
49 chr8:123923800-123928400 Weak transcription Primary B cells from cord blood blood
50 chr8:123923800-123928600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin

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Last update: Aug 31, 2015