The 2.0 version of rSNPBase

Variant report

Variant rs16899577
Chromosome Location chr8:125364942-125364943
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:40 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:125346400-125368200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
2 chr8:125352000-125366400 Weak transcription Primary T cells from cord blood blood
3 chr8:125353000-125376200 Weak transcription HSMM muscle
4 chr8:125354600-125365000 Weak transcription Primary Natural Killer cells fromperipheralblood blood
5 chr8:125355800-125370400 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
6 chr8:125357600-125366600 Weak transcription Right Ventricle heart
7 chr8:125358600-125365000 Weak transcription Left Ventricle heart
8 chr8:125361400-125368000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr8:125362000-125371000 Weak transcription Colon Smooth Muscle Colon
10 chr8:125362800-125367600 Weak transcription Primary T regulatory cells fromperipheralblood blood
11 chr8:125362800-125382800 Weak transcription Ovary ovary
12 chr8:125363000-125369000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
13 chr8:125363200-125365000 Enhancers Primary T killer memory cells from peripheral blood blood
14 chr8:125363400-125368000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
15 chr8:125363400-125369400 Enhancers Primary T helper cells PMA-I stimulated --
16 chr8:125363800-125365000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
17 chr8:125364000-125365200 Enhancers Primary hematopoietic stem cells short term culture blood
18 chr8:125364200-125366600 Weak transcription Small Intestine intestine
19 chr8:125364400-125365400 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
20 chr8:125364400-125366200 Weak transcription Duodenum Mucosa Duodenum
21 chr8:125364400-125366400 Weak transcription Fetal Intestine Small intestine
22 chr8:125364400-125366600 Weak transcription Primary T helper naive cells from peripheral blood blood
23 chr8:125364400-125366800 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr8:125364400-125366800 Weak transcription Pancreatic Islets Pancreatic Islet
25 chr8:125364400-125367400 Weak transcription A549 lung
26 chr8:125364400-125368000 Weak transcription NHDF-Ad bronchial
27 chr8:125364400-125369400 Weak transcription Rectal Mucosa Donor 31 rectum
28 chr8:125364400-125376400 Weak transcription Primary monocytes fromperipheralblood blood
29 chr8:125364400-125378400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
30 chr8:125364600-125365000 Weak transcription Primary T helper cells fromperipheralblood blood
31 chr8:125364600-125365000 Weak transcription Primary T killer naive cells fromperipheralblood blood
32 chr8:125364600-125365000 Weak transcription Skeletal Muscle Female skeletal muscle
33 chr8:125364600-125365200 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
34 chr8:125364600-125366400 Weak transcription Fetal Heart heart
35 chr8:125364800-125365000 Enhancers Primary hematopoietic stem cells blood
36 chr8:125364800-125365000 Enhancers Skeletal Muscle Male skeletal muscle
37 chr8:125364800-125365200 Enhancers Pancreas Pancrea
38 chr8:125364800-125365200 Enhancers Right Atrium heart
39 chr8:125364800-125365600 Enhancers Primary T cells fromperipheralblood blood
40 chr8:125364800-125365600 Enhancers Psoas Muscle Psoas

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Last update: Aug 31, 2015