The 2.0 version of rSNPBase

Variant report

Variant rs28562339
Chromosome Location chr8:125377466-125377467
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:83 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr8:125362800-125382800 Weak transcription Ovary ovary
2 chr8:125364400-125378400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr8:125367000-125378400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
4 chr8:125367000-125380600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
5 chr8:125367200-125382000 Weak transcription HUES6 Cell Line embryonic stem cell
6 chr8:125371400-125380600 Weak transcription Fetal Brain Female brain
7 chr8:125371400-125382800 Weak transcription Fetal Intestine Large intestine
8 chr8:125372000-125378200 Weak transcription Psoas Muscle Psoas
9 chr8:125372000-125380600 Weak transcription Breast Myoepithelial Primary Cells Breast
10 chr8:125372600-125378200 Weak transcription Left Ventricle heart
11 chr8:125372600-125380800 Weak transcription Right Ventricle heart
12 chr8:125373200-125381000 Weak transcription Brain Germinal Matrix brain
13 chr8:125374800-125377600 Weak transcription Sigmoid Colon Sigmoid Colon
14 chr8:125374800-125380600 Weak transcription Right Atrium heart
15 chr8:125375600-125380000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
16 chr8:125376200-125377600 Enhancers Monocytes-CD14+_RO01746 blood
17 chr8:125376200-125377800 Enhancers Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
18 chr8:125376200-125377800 Enhancers Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
19 chr8:125376200-125377800 Enhancers Primary hematopoietic stem cells short term culture blood
20 chr8:125376200-125377800 Enhancers Primary T killer memory cells from peripheral blood blood
21 chr8:125376200-125377800 Enhancers Muscle Satellite Cultured Cells --
22 chr8:125376200-125377800 Enhancers Hela-S3 cervix
23 chr8:125376200-125377800 Enhancers HSMM muscle
24 chr8:125376200-125377800 Enhancers NHDF-Ad bronchial
25 chr8:125376200-125378200 Enhancers Primary T helper naive cells from peripheral blood blood
26 chr8:125376200-125378400 Enhancers Primary T killer naive cells fromperipheralblood blood
27 chr8:125376200-125378600 Enhancers Primary T helper naive cells fromperipheralblood blood
28 chr8:125376200-125379200 Enhancers Rectal Mucosa Donor 31 rectum
29 chr8:125376200-125379400 Enhancers Primary B cells from peripheral blood blood
30 chr8:125376200-125379600 Enhancers Primary T cells from cord blood blood
31 chr8:125376200-125379600 Enhancers Primary T helper memory cells from peripheral blood 2 blood
32 chr8:125376200-125379600 Enhancers Primary T helper cells fromperipheralblood blood
33 chr8:125376200-125380600 Enhancers Primary T helper cells PMA-I stimulated --
34 chr8:125376200-125380600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
35 chr8:125376200-125381600 Enhancers Primary T helper 17 cells PMA-I stimulated --
36 chr8:125376400-125377800 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
37 chr8:125376400-125377800 Enhancers Primary B cells from cord blood blood
38 chr8:125376400-125377800 Enhancers Primary hematopoietic stem cells blood
39 chr8:125376400-125377800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
40 chr8:125376400-125377800 Flanking Active TSS Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr8:125376400-125377800 Enhancers Skeletal Muscle Female skeletal muscle
42 chr8:125376400-125382000 Enhancers Primary T regulatory cells fromperipheralblood blood
43 chr8:125376600-125382000 Weak transcription HUES48 Cell Line embryonic stem cell
44 chr8:125376800-125377600 Weak transcription Small Intestine intestine
45 chr8:125376800-125377600 Flanking Active TSS HUVEC blood vessel
46 chr8:125376800-125378000 Weak transcription Primary T cells fromperipheralblood blood
47 chr8:125376800-125378000 Weak transcription HepG2 liver
48 chr8:125376800-125380800 Weak transcription HUES64 Cell Line embryonic stem cell
49 chr8:125376800-125380800 Weak transcription Primary monocytes fromperipheralblood blood
50 chr8:125376800-125381600 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin

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Last update: Aug 31, 2015