Variant report
Variant | rs16914070 |
---|---|
Chromosome Location | chr8:50852969-50852970 |
allele | A/G |
Outlinks | Ensembl   UCSC |
- TF binding region (count:0)
- CpG islands (count:0)
- Chromatin interactive region (count:1)
- LncRNA region (count:0)
- Mature miRNA region (count: 0)
- miRNA target sites (count:0)
No data |
No data |
(count:1 , 50 per page) page:
1
No. | Distal block | Cell Line | Cell type | Cell Stage |
---|---|---|---|---|
1 | chr8:50851071..50853810-chr8:50856546..50858320,2 | MCF-7 | breast: |
No data |
No data |
No data |
No data |
rs_ID | r2[population] |
---|---|
rs10046680 | 1.00[ASW][hapmap];0.88[YRI][hapmap] |
rs10097416 | 0.88[YRI][hapmap] |
rs10113044 | 1.00[AMR][1000 genomes] |
rs1352117 | 1.00[ASN][1000 genomes] |
rs16913838 | 0.80[YRI][hapmap];1.00[AMR][1000 genomes] |
rs16913859 | 1.00[ASW][hapmap];0.88[MKK][hapmap];1.00[YRI][hapmap];1.00[AMR][1000 genomes] |
rs16913881 | 0.80[YRI][hapmap];1.00[AMR][1000 genomes] |
rs16913981 | 0.80[YRI][hapmap];1.00[AMR][1000 genomes] |
rs16914042 | 1.00[YRI][hapmap];1.00[AMR][1000 genomes] |
rs16914099 | 0.80[YRI][hapmap] |
rs16914125 | 0.80[YRI][hapmap] |
rs16914130 | 0.80[YRI][hapmap] |
rs2306742 | 0.80[YRI][hapmap];1.00[AMR][1000 genomes] |
rs28529396 | 1.00[AMR][1000 genomes] |
rs57307349 | 1.00[AMR][1000 genomes] |
rs57882761 | 1.00[AMR][1000 genomes] |
rs58254228 | 1.00[AMR][1000 genomes] |
rs58520473 | 1.00[AMR][1000 genomes] |
rs58740018 | 1.00[ASN][1000 genomes] |
rs60153766 | 1.00[AMR][1000 genomes] |
rs60356093 | 1.00[AMR][1000 genomes] |
rs61374770 | 1.00[AMR][1000 genomes] |
rs73569305 | 1.00[AMR][1000 genomes] |
rs73569306 | 1.00[AMR][1000 genomes] |
rs73569315 | 1.00[AMR][1000 genomes] |
rs73569317 | 1.00[AMR][1000 genomes] |
rs73569327 | 1.00[AMR][1000 genomes] |
rs73569333 | 1.00[AMR][1000 genomes] |
rs73569338 | 1.00[AMR][1000 genomes] |
rs73569339 | 1.00[AMR][1000 genomes] |
rs73569343 | 1.00[AMR][1000 genomes] |
rs73584719 | 1.00[AMR][1000 genomes] |
rs73584722 | 1.00[AMR][1000 genomes] |
rs73584723 | 1.00[AMR][1000 genomes] |
rs73584728 | 1.00[AMR][1000 genomes] |
rs73584754 | 1.00[AMR][1000 genomes] |
rs73584758 | 1.00[AMR][1000 genomes] |
rs73584759 | 1.00[AMR][1000 genomes] |
rs73584763 | 1.00[AMR][1000 genomes] |
rs73584765 | 1.00[AMR][1000 genomes] |
rs73584768 | 1.00[AMR][1000 genomes] |
rs73584770 | 1.00[AMR][1000 genomes] |
rs73584771 | 1.00[AMR][1000 genomes] |
rs73584773 | 1.00[AMR][1000 genomes] |
rs73676082 | 1.00[AMR][1000 genomes] |

No. | Variant name | Chromosome position | Chromatin state | Related regulatory elements | Target genes | Extended variants | Associated traits |
---|---|---|---|---|---|---|---|
1 | esv3353749 | chr8:50530807-51139242 | Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers | TF binding regionCpG islandChromatin interactive regionlncRNA | 5 gene(s) | inside rSNPs | diseases |
2 | nsv916392 | chr8:50827638-51395140 | Enhancers Weak transcription Strong transcription Active TSS ZNF genes & repeats Flanking Active TSS Bivalent Enhancer Flanking Bivalent TSS/Enh | TF binding regionCpG islandChromatin interactive regionlncRNA | 2 gene(s) | inside rSNPs | diseases |
No data |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr8:50838600-50854400 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
2 | chr8:50838800-50853200 | Weak transcription | Cortex derived primary cultured neurospheres | brain |
3 | chr8:50848800-50857800 | Weak transcription | iPS-18 Cell Line | embryonic stem cell |