Variant report

Variant	rs73584728
Chromosome Location	chr8:50802050-50802051
allele	A/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 47 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:46)

rs_ID	r²[population]
rs10113044	1.00[AMR][1000 genomes]
rs16913838	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16913859	1.00[AMR][1000 genomes]
rs16913881	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16913981	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs16914042	1.00[AMR][1000 genomes]
rs16914070	1.00[AMR][1000 genomes]
rs2306742	0.98[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs28433725	0.90[ASN][1000 genomes]
rs28529396	1.00[AMR][1000 genomes]
rs57307349	1.00[AMR][1000 genomes]
rs57882761	1.00[AMR][1000 genomes]
rs58254228	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs58520473	1.00[AMR][1000 genomes]
rs58740018	1.00[EUR][1000 genomes]
rs59272691	1.00[EUR][1000 genomes]
rs59841322	1.00[EUR][1000 genomes]
rs60153766	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs60356093	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs61374770	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs6983019	0.90[ASN][1000 genomes]
rs73569305	1.00[AMR][1000 genomes]
rs73569306	1.00[AMR][1000 genomes]
rs73569315	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73569317	0.92[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73569327	1.00[AMR][1000 genomes]
rs73569333	1.00[AMR][1000 genomes]
rs73569338	1.00[AMR][1000 genomes]
rs73569339	1.00[AMR][1000 genomes]
rs73569343	1.00[AMR][1000 genomes]
rs73584719	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73584722	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73584723	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs73584754	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584758	1.00[AMR][1000 genomes]
rs73584759	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584763	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584765	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584768	1.00[AMR][1000 genomes]
rs73584770	1.00[AMR][1000 genomes]
rs73584771	1.00[AMR][1000 genomes];1.00[EUR][1000 genomes]
rs73584773	1.00[AMR][1000 genomes]
rs73676082	1.00[AMR][1000 genomes]
rs73677815	1.00[EUR][1000 genomes]
rs7834858	1.00[EUR][1000 genomes]
rs9298227	0.90[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	esv3353749	chr8:50530807-51139242	Enhancers Weak transcription Strong transcription Bivalent/Poised TSS Flanking Bivalent TSS/Enh Active TSS Flanking Active TSS Bivalent Enhancer ZNF genes & repeats Genic enhancers	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:1 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr8:50801000-50802400	Enhancers	Liver	Liver

The 2.0 version of rSNPBase

Variant report

Quick Search:

what's new

Quick links