Variant report

Variant	rs16916985
Chromosome Location	chr10:18500206-18500207
allele	C/T
Outlinks	Ensembl UCSC

Chromatin state
Related regulatory elements
Target genes
Other information

Extended variants
information (count: 17 )
Associated
traits (count: 0)

rSNPs within LD-proxies of this variant (count:17)

rs_ID	r²[population]
rs11013030	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs11013034	0.86[ASN][1000 genomes]
rs11013039	0.94[ASN][1000 genomes]
rs12098280	1.00[ASN][1000 genomes]
rs1475613	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16916953	0.85[CHB][hapmap];1.00[JPT][hapmap];0.84[ASN][1000 genomes]
rs16916963	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs16916965	1.00[CHB][hapmap];1.00[JPT][hapmap];0.97[ASN][1000 genomes]
rs16916984	1.00[CHB][hapmap];1.00[JPT][hapmap];1.00[ASN][1000 genomes]
rs16916992	1.00[CHB][hapmap];1.00[JPT][hapmap];0.94[ASN][1000 genomes]
rs57461028	1.00[ASN][1000 genomes]
rs59304020	0.86[ASN][1000 genomes]
rs73595503	0.97[ASN][1000 genomes]
rs73595504	0.86[ASN][1000 genomes]
rs73595510	1.00[ASN][1000 genomes]
rs73595543	0.94[ASN][1000 genomes]
rs7914927	1.00[JPT][hapmap];1.00[ASN][1000 genomes]

No data

Chromatin state (count:17 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr10:18485000-18503800	Weak transcription	Duodenum Smooth Muscle	Duodenum
2	chr10:18486800-18502000	Weak transcription	Fetal Stomach	stomach
3	chr10:18493800-18503800	Weak transcription	Fetal Brain Male	brain
4	chr10:18494400-18503600	Weak transcription	Mesenchymal Stem Cell Derived Adipocyte Cultured Cells	ES cell derived
5	chr10:18495200-18501400	Weak transcription	Stomach Smooth Muscle	stomach
6	chr10:18497800-18503000	Enhancers	Fetal Heart	heart
7	chr10:18498600-18502800	Enhancers	Primary hematopoietic stem cells G-CSF-mobilized Male	--
8	chr10:18499200-18500800	Weak transcription	Primary hematopoietic stem cells	blood
9	chr10:18499200-18501400	Weak transcription	Primary hematopoietic stem cells G-CSF-mobilized Female	--
10	chr10:18499200-18511000	Weak transcription	Aorta	Aorta
11	chr10:18499600-18500600	Weak transcription	H1 BMP4 Derived Mesendoderm Cultured Cells	ES cell derived
12	chr10:18499600-18500800	Enhancers	Pancreatic Islets	Pancreatic Islet
13	chr10:18499800-18500400	Enhancers	Duodenum Mucosa	Duodenum
14	chr10:18500000-18500400	Weak transcription	Colon Smooth Muscle	Colon
15	chr10:18500000-18504800	Enhancers	Rectal Smooth Muscle	rectum
16	chr10:18500200-18501800	Weak transcription	Left Ventricle	heart
17	chr10:18500200-18506000	Weak transcription	Right Atrium	heart

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Input of quick search could be:

dbSNP/dbVar ID: rs12345 /nsv7879
a single nucleotide as 0-based coordinates: chr1:12345
chromosomal regions: chr1:12345-34567

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