The 2.0 version of rSNPBase

Variant report

Variant rs16920957
Chromosome Location chr9:100248919-100248920
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:94 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100182200-100263400 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
2 chr9:100195400-100259800 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
3 chr9:100203600-100262000 Weak transcription Stomach Mucosa stomach
4 chr9:100205400-100250000 Weak transcription Esophagus oesophagus
5 chr9:100222200-100250000 Strong transcription Monocytes-CD14+_RO01746 blood
6 chr9:100222600-100252000 Strong transcription Primary monocytes fromperipheralblood blood
7 chr9:100226400-100252600 Strong transcription Primary Natural Killer cells fromperipheralblood blood
8 chr9:100226600-100261600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
9 chr9:100226600-100262000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr9:100228600-100261200 Weak transcription Fetal Stomach stomach
11 chr9:100229400-100258600 Weak transcription Fetal Adrenal Gland Adrenal Gland
12 chr9:100231400-100250800 Weak transcription Muscle Satellite Cultured Cells --
13 chr9:100232600-100253600 Weak transcription Colon Smooth Muscle Colon
14 chr9:100236800-100258600 Weak transcription Skeletal Muscle Male skeletal muscle
15 chr9:100237400-100250400 Weak transcription Rectal Smooth Muscle rectum
16 chr9:100237400-100250600 Weak transcription HSMMtube muscle
17 chr9:100237600-100258600 Weak transcription Skeletal Muscle Female skeletal muscle
18 chr9:100237600-100261600 Weak transcription NHLF lung
19 chr9:100237800-100250400 Weak transcription NHDF-Ad bronchial
20 chr9:100238600-100250000 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
21 chr9:100241000-100251800 Strong transcription Primary neutrophils fromperipheralblood blood
22 chr9:100241200-100250800 Weak transcription Pancreatic Islets Pancreatic Islet
23 chr9:100241800-100249000 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
24 chr9:100242400-100250200 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr9:100242600-100250200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
26 chr9:100242600-100250200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
27 chr9:100243200-100249600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
28 chr9:100243600-100252600 Weak transcription Fetal Thymus thymus
29 chr9:100243800-100260400 Weak transcription Fetal Kidney kidney
30 chr9:100244400-100249800 Strong transcription Primary mononuclear cells fromperipheralblood Blood
31 chr9:100244400-100251400 Strong transcription Fetal Intestine Large intestine
32 chr9:100244400-100252800 Strong transcription Rectal Mucosa Donor 31 rectum
33 chr9:100244600-100250400 Strong transcription Primary B cells from cord blood blood
34 chr9:100244600-100255400 Strong transcription Primary B cells from peripheral blood blood
35 chr9:100244800-100250200 Strong transcription Primary T helper naive cells fromperipheralblood blood
36 chr9:100244800-100250400 Strong transcription Primary T helper cells fromperipheralblood blood
37 chr9:100244800-100262000 Weak transcription HSMM muscle
38 chr9:100245400-100261800 Weak transcription Fetal Brain Male brain
39 chr9:100245600-100249600 Weak transcription Primary hematopoietic stem cells blood
40 chr9:100245600-100250000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr9:100245600-100250200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
42 chr9:100245600-100250200 Weak transcription Aorta Aorta
43 chr9:100245600-100250200 Weak transcription Ovary ovary
44 chr9:100245600-100250400 Weak transcription Left Ventricle heart
45 chr9:100245600-100250400 Weak transcription Spleen Spleen
46 chr9:100245600-100250400 Weak transcription GM12878-XiMat blood
47 chr9:100245600-100250600 Weak transcription Placenta Placenta
48 chr9:100245600-100252400 Weak transcription A549 lung
49 chr9:100245600-100258000 Weak transcription Gastric stomach
50 chr9:100245600-100258000 Weak transcription Lung lung

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Last update: Aug 31, 2015