The 2.0 version of rSNPBase

Variant report

Variant rs2290934
Chromosome Location chr9:100059090-100059091
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:72 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100035000-100059600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
2 chr9:100041400-100059600 Weak transcription Fetal Brain Male brain
3 chr9:100046600-100069000 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
4 chr9:100051200-100061000 Weak transcription Colonic Mucosa Colon
5 chr9:100051400-100059400 Weak transcription Primary T killer naive cells fromperipheralblood blood
6 chr9:100053600-100059200 Weak transcription Monocytes-CD14+_RO01746 blood
7 chr9:100053600-100061400 Weak transcription Placenta Amnion Placenta Amnion
8 chr9:100053600-100062600 Weak transcription Hela-S3 cervix
9 chr9:100053800-100059600 Weak transcription Pancreatic Islets Pancreatic Islet
10 chr9:100053800-100059800 Weak transcription Sigmoid Colon Sigmoid Colon
11 chr9:100053800-100060400 Weak transcription H9 Cell Line embryonic stem cell
12 chr9:100054200-100059400 Weak transcription Primary T helper cells PMA-I stimulated --
13 chr9:100054200-100060600 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
14 chr9:100054400-100059400 Weak transcription Primary B cells from cord blood blood
15 chr9:100054400-100059800 Weak transcription Colon Smooth Muscle Colon
16 chr9:100054800-100059200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
17 chr9:100054800-100060000 Weak transcription Rectal Mucosa Donor 29 rectum
18 chr9:100054800-100069000 Weak transcription HUES48 Cell Line embryonic stem cell
19 chr9:100054800-100069400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
20 chr9:100055000-100069400 Weak transcription Rectal Smooth Muscle rectum
21 chr9:100055800-100059200 Weak transcription ES-I3 Cell Line embryonic stem cell
22 chr9:100056000-100059400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
23 chr9:100056000-100059600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
24 chr9:100056200-100059400 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
25 chr9:100056200-100069200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
26 chr9:100056400-100060400 Weak transcription Fetal Heart heart
27 chr9:100056400-100062400 Weak transcription NHDF-Ad bronchial
28 chr9:100056400-100064000 Weak transcription NHLF lung
29 chr9:100056600-100059200 Weak transcription Primary T helper cells fromperipheralblood blood
30 chr9:100056600-100059400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
31 chr9:100056600-100059800 Weak transcription Fetal Lung lung
32 chr9:100057000-100075000 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
33 chr9:100057200-100059200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
34 chr9:100057200-100059400 Weak transcription Primary B cells from peripheral blood blood
35 chr9:100057400-100075400 Weak transcription Dnd41 blood
36 chr9:100057600-100059600 Weak transcription Primary hematopoietic stem cells blood
37 chr9:100057600-100059600 Weak transcription Liver Liver
38 chr9:100057600-100059600 Weak transcription Duodenum Mucosa Duodenum
39 chr9:100057600-100060400 ZNF genes & repeats Primary hematopoietic stem cells G-CSF-mobilized Male --
40 chr9:100057600-100069000 Weak transcription Brain Hippocampus Middle brain
41 chr9:100057800-100059400 Weak transcription H1 Cell Line embryonic stem cell
42 chr9:100057800-100059600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
43 chr9:100057800-100059600 Weak transcription Primary hematopoietic stem cells short term culture blood
44 chr9:100057800-100059600 Weak transcription Primary T helper naive cells fromperipheralblood blood
45 chr9:100057800-100059600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
46 chr9:100057800-100059600 Weak transcription Fetal Kidney kidney
47 chr9:100057800-100059800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
48 chr9:100057800-100060000 Weak transcription Adipose Nuclei Adipose
49 chr9:100057800-100060200 Weak transcription Fetal Adrenal Gland Adrenal Gland
50 chr9:100057800-100069000 Weak transcription Brain Cingulate Gyrus brain

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Last update: Aug 31, 2015