The 2.0 version of rSNPBase

Variant report

Variant rs61701966
Chromosome Location chr9:100041578-100041579
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:117 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr9:100024400-100042600 Weak transcription Fetal Heart heart
2 chr9:100025800-100050200 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
3 chr9:100035000-100059600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
4 chr9:100036400-100042600 Weak transcription Colonic Mucosa Colon
5 chr9:100036800-100052200 Weak transcription Stomach Mucosa stomach
6 chr9:100037200-100050200 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
7 chr9:100037400-100047000 Strong transcription Fetal Muscle Trunk muscle
8 chr9:100037800-100046600 Strong transcription Stomach Smooth Muscle stomach
9 chr9:100038200-100050600 Weak transcription Esophagus oesophagus
10 chr9:100038400-100041800 Weak transcription Muscle Satellite Cultured Cells --
11 chr9:100038600-100041600 Strong transcription Primary mononuclear cells fromperipheralblood Blood
12 chr9:100038600-100042000 Strong transcription Ganglion Eminence derived primary cultured neurospheres brain
13 chr9:100038600-100043800 Weak transcription Psoas Muscle Psoas
14 chr9:100038600-100044000 Strong transcription Fetal Adrenal Gland Adrenal Gland
15 chr9:100038600-100044400 Strong transcription Fetal Intestine Large intestine
16 chr9:100038600-100044600 Strong transcription Primary T regulatory cells fromperipheralblood blood
17 chr9:100038600-100045800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
18 chr9:100038600-100046800 Strong transcription Brain Anterior Caudate brain
19 chr9:100038600-100047600 Weak transcription HepG2 liver
20 chr9:100038800-100041600 Strong transcription Aorta Aorta
21 chr9:100038800-100041600 Strong transcription Brain Angular Gyrus brain
22 chr9:100038800-100041600 Strong transcription Fetal Stomach stomach
23 chr9:100038800-100044800 Strong transcription Primary B cells from peripheral blood blood
24 chr9:100038800-100046400 Strong transcription Ovary ovary
25 chr9:100038800-100047200 Strong transcription Liver Liver
26 chr9:100038800-100050400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
27 chr9:100039000-100043400 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
28 chr9:100039000-100044000 Strong transcription Primary hematopoietic stem cells short term culture blood
29 chr9:100039000-100046400 Strong transcription Fetal Muscle Leg muscle
30 chr9:100039000-100047000 Strong transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
31 chr9:100039000-100047000 Strong transcription Skeletal Muscle Male skeletal muscle
32 chr9:100039000-100050600 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
33 chr9:100039000-100052800 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
34 chr9:100039000-100053000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr9:100039000-100054200 Strong transcription Foreskin Melanocyte Primary Cells skin03 Skin
36 chr9:100039200-100052800 Weak transcription ES-WA7 Cell Line embryonic stem cell
37 chr9:100039200-100056400 Weak transcription Small Intestine intestine
38 chr9:100039400-100041600 Strong transcription Primary T helper cells PMA-I stimulated --
39 chr9:100039400-100044000 Strong transcription Brain Germinal Matrix brain
40 chr9:100039400-100044200 Strong transcription Primary T cells fromperipheralblood blood
41 chr9:100039400-100044200 Strong transcription Brain Hippocampus Middle brain
42 chr9:100039400-100044400 Strong transcription Monocytes-CD14+_RO01746 blood
43 chr9:100039400-100044600 Strong transcription Primary T helper cells fromperipheralblood blood
44 chr9:100039400-100044800 Strong transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
45 chr9:100039400-100046400 Strong transcription Left Ventricle heart
46 chr9:100039400-100046600 Strong transcription Duodenum Smooth Muscle Duodenum
47 chr9:100039400-100046800 Strong transcription Primary T cells from cord blood blood
48 chr9:100039600-100041600 Strong transcription Fetal Lung lung
49 chr9:100039600-100043000 Weak transcription H9 Cell Line embryonic stem cell
50 chr9:100039600-100043600 Weak transcription ES-I3 Cell Line embryonic stem cell

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Last update: Aug 31, 2015