The 2.0 version of rSNPBase

Variant report

Variant rs16931141
Chromosome Location chr12:4225150-4225151
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:67 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:4219800-4228000 Enhancers Fetal Muscle Leg muscle
2 chr12:4222600-4225400 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
3 chr12:4223800-4226600 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Male --
4 chr12:4223800-4227200 Enhancers Primary hematopoietic stem cells blood
5 chr12:4223800-4227400 Enhancers Foreskin Keratinocyte Primary Cells skin03 Skin
6 chr12:4223800-4227600 Enhancers Primary T cells from cord blood blood
7 chr12:4223800-4228000 Enhancers Foreskin Keratinocyte Primary Cells skin02 Skin
8 chr12:4223800-4228200 Enhancers HMEC breast
9 chr12:4224000-4226000 Enhancers HUES6 Cell Line embryonic stem cell
10 chr12:4224000-4226000 Enhancers iPS-18 Cell Line embryonic stem cell
11 chr12:4224000-4226200 Enhancers HSMM muscle
12 chr12:4224000-4226400 Enhancers H9 Cell Line embryonic stem cell
13 chr12:4224000-4226600 Enhancers Primary hematopoietic stem cells short term culture blood
14 chr12:4224000-4226800 Enhancers Primary hematopoietic stem cells G-CSF-mobilized Female --
15 chr12:4224000-4227000 Enhancers Primary B cells from cord blood blood
16 chr12:4224000-4227000 Enhancers Primary T helper 17 cells PMA-I stimulated --
17 chr12:4224000-4227400 Enhancers Primary T helper cells PMA-I stimulated --
18 chr12:4224000-4228800 Enhancers Primary T helper cells fromperipheralblood blood
19 chr12:4224000-4229000 Enhancers Primary T helper memory cells from peripheral blood 2 blood
20 chr12:4224000-4229000 Enhancers Primary T helper memory cells from peripheral blood 1 blood
21 chr12:4224200-4225200 Flanking Active TSS Primary T regulatory cells fromperipheralblood blood
22 chr12:4224200-4226200 Bivalent Enhancer Primary T cells fromperipheralblood blood
23 chr12:4224200-4226800 Enhancers ES-UCSF4 Cell Line embryonic stem cell
24 chr12:4224200-4227200 Enhancers H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
25 chr12:4224200-4227600 Enhancers Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
26 chr12:4224200-4228200 Enhancers Primary neutrophils fromperipheralblood blood
27 chr12:4224200-4228800 Enhancers Primary Natural Killer cells fromperipheralblood blood
28 chr12:4224200-4228800 Enhancers Fetal Thymus thymus
29 chr12:4224200-4230000 Enhancers Primary B cells from peripheral blood blood
30 chr12:4224400-4226400 Enhancers H1 Cell Line embryonic stem cell
31 chr12:4224400-4226600 Weak transcription Primary T helper naive cells from peripheral blood blood
32 chr12:4224400-4227000 Enhancers iPS DF 19.11 Cell Line embryonic stem cell
33 chr12:4224600-4225200 Active TSS ES-I3 Cell Line embryonic stem cell
34 chr12:4224600-4225200 Enhancers ES-WA7 Cell Line embryonic stem cell
35 chr12:4224600-4225800 Enhancers Primary T cells effector/memory enriched fromperipheralblood blood
36 chr12:4224600-4226000 Enhancers H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
37 chr12:4224600-4226200 Enhancers Placenta Placenta
38 chr12:4224600-4226400 Enhancers HUES64 Cell Line embryonic stem cell
39 chr12:4224600-4228000 Enhancers hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
40 chr12:4224600-4228200 Enhancers H1 Derived Mesenchymal Stem Cells ES cell derived
41 chr12:4224600-4228200 Enhancers Fetal Intestine Large intestine
42 chr12:4224600-4229000 Flanking Active TSS GM12878-XiMat blood
43 chr12:4224800-4225200 Flanking Bivalent TSS/Enh Fetal Muscle Trunk muscle
44 chr12:4224800-4225600 Flanking Active TSS Duodenum Mucosa Duodenum
45 chr12:4224800-4225600 Enhancers Rectal Mucosa Donor 29 rectum
46 chr12:4224800-4226000 Weak transcription Small Intestine intestine
47 chr12:4224800-4226000 Enhancers Thymus Thymus
48 chr12:4224800-4226200 Enhancers HSMMtube muscle
49 chr12:4224800-4226600 Enhancers Colonic Mucosa Colon
50 chr12:4224800-4227000 Enhancers Rectal Mucosa Donor 31 rectum

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Last update: Aug 31, 2015