The 2.0 version of rSNPBase

Variant report

Variant rs55787213
Chromosome Location chr12:4221020-4221021
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:19 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr12:4216000-4224000 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
2 chr12:4216600-4224000 Weak transcription Primary hematopoietic stem cells short term culture blood
3 chr12:4216800-4225000 Weak transcription Placenta Amnion Placenta Amnion
4 chr12:4217000-4221400 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr12:4217000-4222200 Weak transcription Fetal Thymus thymus
6 chr12:4217000-4223800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
7 chr12:4217000-4224000 Weak transcription Primary T regulatory cells fromperipheralblood blood
8 chr12:4219200-4221400 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
9 chr12:4219200-4221400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
10 chr12:4219200-4222200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
11 chr12:4219400-4221400 Weak transcription HMEC breast
12 chr12:4219400-4221400 Weak transcription NHEK skin
13 chr12:4219800-4228000 Enhancers Fetal Muscle Leg muscle
14 chr12:4220200-4221400 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
15 chr12:4220400-4222000 Enhancers Primary neutrophils fromperipheralblood blood
16 chr12:4220600-4221600 Weak transcription HSMMtube muscle
17 chr12:4220600-4221800 Enhancers GM12878-XiMat blood
18 chr12:4220600-4221800 Weak transcription HSMM muscle
19 chr12:4221000-4222200 Weak transcription Fetal Lung lung

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Last update: Aug 31, 2015