Variant report

rSNPs within LD-proxies of this variant (count:24)

rs_ID	r²[population]
rs11003985	0.80[CHB][hapmap]
rs11003992	0.80[CHB][hapmap]
rs11003995	0.80[CHB][hapmap]
rs11004049	0.80[JPT][hapmap]
rs11004051	0.80[JPT][hapmap]
rs12217383	1.00[MEX][hapmap]
rs12220450	1.00[MEX][hapmap]
rs12243844	1.00[TSI][hapmap]
rs16937870	1.00[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];1.00[JPT][hapmap]
rs16937873	1.00[MEX][hapmap]
rs16937881	0.93[CHB][hapmap];0.92[CHD][hapmap];1.00[GIH][hapmap];0.80[JPT][hapmap];1.00[TSI][hapmap]
rs16937917	1.00[TSI][hapmap]
rs1911415	0.80[JPT][hapmap]
rs2102356	1.00[TSI][hapmap]
rs57385317	0.96[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];0.97[ASN][1000 genomes]
rs7077514	1.00[MEX][hapmap];0.81[AMR][1000 genomes]
rs7079133	0.90[JPT][hapmap]
rs74134957	1.00[EUR][1000 genomes];0.90[ASN][1000 genomes]
rs74134958	0.87[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs74134959	0.81[AMR][1000 genomes];1.00[EUR][1000 genomes];0.93[ASN][1000 genomes]
rs7909729	1.00[TSI][hapmap]
rs7917046	0.80[CHB][hapmap]
rs7918590	0.80[CHB][hapmap];1.00[MEX][hapmap]
rs8181397	0.81[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv949692	chr10:55502542-55893206	Enhancers Weak transcription ZNF genes & repeats Active TSS Flanking Active TSS Bivalent/Poised TSS Strong transcription	TF binding region CpG island Chromatin interactive region lncRNA	4 gene(s)	inside rSNPs	diseases
2	nsv869303	chr10:55714219-55857931	ZNF genes & repeats Enhancers Weak transcription	Chromatin interactive region	n/a	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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