Variant report
| Variant | rs16985909 |
|---|---|
| Chromosome Location | chr22:28427392-28427393 |
| allele | C/T |
| Outlinks | Ensembl UCSC |
| No. | Chromosome Location | Chromatin state | Cell line | Tissue |
|---|---|---|---|---|
| 1 | chr22:28409000-28428000 | Genic enhancers | Fetal Muscle Leg | muscle |
| 2 | chr22:28409400-28430400 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
| 3 | chr22:28416600-28431000 | Weak transcription | Primary T helper naive cells fromperipheralblood | blood |
| 4 | chr22:28418600-28429800 | Strong transcription | Dnd41 | blood |
| 5 | chr22:28419800-28427400 | Enhancers | Skeletal Muscle Female | skeletal muscle |
| 6 | chr22:28423000-28427400 | Enhancers | Brain Cingulate Gyrus | brain |
| 7 | chr22:28423000-28427400 | Genic enhancers | Fetal Brain Female | brain |
| 8 | chr22:28423000-28427600 | Enhancers | Ganglion Eminence derived primary cultured neurospheres | brain |
| 9 | chr22:28423000-28427600 | Enhancers | Esophagus | oesophagus |
| 10 | chr22:28423200-28427400 | Enhancers | HUVEC | blood vessel |
| 11 | chr22:28423200-28427800 | Enhancers | Colon Smooth Muscle | Colon |
| 12 | chr22:28423400-28427600 | Enhancers | Pancreas | Pancrea |
| 13 | chr22:28423400-28431800 | Enhancers | Fetal Thymus | thymus |
| 14 | chr22:28424600-28427400 | Enhancers | Brain Inferior Temporal Lobe | brain |
| 15 | chr22:28425400-28427800 | Enhancers | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
| 16 | chr22:28425400-28428400 | Weak transcription | K562 | blood |
| 17 | chr22:28425400-28430400 | Weak transcription | HSMMtube | muscle |
| 18 | chr22:28425400-28430600 | Weak transcription | Rectal Mucosa Donor 31 | rectum |
| 19 | chr22:28425600-28430200 | Weak transcription | HSMM | muscle |
| 20 | chr22:28425600-28430600 | Weak transcription | NH-A | brain |
| 21 | chr22:28425600-28430600 | Weak transcription | Osteobl | bone |
| 22 | chr22:28425600-28430800 | Weak transcription | Thymus | Thymus |
| 23 | chr22:28425800-28430200 | Weak transcription | Aorta | Aorta |
| 24 | chr22:28425800-28430200 | Weak transcription | Ovary | ovary |
| 25 | chr22:28425800-28430400 | Weak transcription | Muscle Satellite Cultured Cells | -- |
| 26 | chr22:28426000-28428400 | Weak transcription | hESC Derived CD184+ Endoderm Cultured Cells | ES cell derived |
| 27 | chr22:28426000-28428400 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
| 28 | chr22:28426000-28428400 | Weak transcription | Fetal Heart | heart |
| 29 | chr22:28426000-28430400 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
| 30 | chr22:28426200-28427400 | Weak transcription | hESC Derived CD56+ Mesoderm Cultured Cells | ES cell derived |
| 31 | chr22:28426200-28427400 | Enhancers | Fetal Lung | lung |
| 32 | chr22:28426200-28427400 | Enhancers | Skeletal Muscle Male | skeletal muscle |
| 33 | chr22:28426200-28427600 | Enhancers | Fetal Muscle Trunk | muscle |
| 34 | chr22:28426200-28427600 | Enhancers | Lung | lung |
| 35 | chr22:28426200-28427800 | Strong transcription | IMR90 fetal lung fibroblasts Cell Line | lung |
| 36 | chr22:28426200-28428800 | Weak transcription | Brain Germinal Matrix | brain |
| 37 | chr22:28426200-28428800 | Weak transcription | Placenta | Placenta |
| 38 | chr22:28426200-28429800 | Weak transcription | Stomach Smooth Muscle | stomach |
| 39 | chr22:28426200-28430000 | Weak transcription | Right Ventricle | heart |
| 40 | chr22:28426200-28430200 | Weak transcription | Duodenum Mucosa | Duodenum |
| 41 | chr22:28426200-28430200 | Weak transcription | Fetal Intestine Large | intestine |
| 42 | chr22:28426200-28430200 | Weak transcription | NHLF | lung |
| 43 | chr22:28426200-28430400 | Weak transcription | NHDF-Ad | bronchial |
| 44 | chr22:28426400-28428800 | Weak transcription | Adipose Nuclei | Adipose |
| 45 | chr22:28426400-28429200 | Weak transcription | Mesenchymal Stem Cell Derived Adipocyte Cultured Cells | ES cell derived |
| 46 | chr22:28426400-28429800 | Weak transcription | Primary hematopoietic stem cells short term culture | blood |
| 47 | chr22:28426400-28430000 | Weak transcription | Psoas Muscle | Psoas |
| 48 | chr22:28426400-28430400 | Weak transcription | Bone Marrow Derived Cultured Mesenchymal Stem Cells | Bone marrow |
| 49 | chr22:28426400-28430400 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
| 50 | chr22:28426400-28430400 | Weak transcription | Stomach Mucosa | stomach |
