The 2.0 version of rSNPBase

Variant report

Variant rs17481471
Chromosome Location chr22:28334599-28334600
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:50 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:28316200-28337400 Weak transcription Ovary ovary
2 chr22:28316400-28335000 Weak transcription Colonic Mucosa Colon
3 chr22:28316400-28336800 Weak transcription Fetal Muscle Leg muscle
4 chr22:28316400-28342600 Weak transcription Primary mononuclear cells fromperipheralblood Blood
5 chr22:28316400-28358600 Weak transcription Placenta Placenta
6 chr22:28316400-28370200 Weak transcription Primary T cells fromperipheralblood blood
7 chr22:28316400-28376800 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
8 chr22:28316400-28378000 Weak transcription Esophagus oesophagus
9 chr22:28316600-28348400 Weak transcription Brain Substantia Nigra brain
10 chr22:28316800-28336600 Weak transcription Fetal Intestine Large intestine
11 chr22:28316800-28340400 Weak transcription Primary T regulatory cells fromperipheralblood blood
12 chr22:28317000-28338800 Weak transcription Fetal Intestine Small intestine
13 chr22:28317000-28340800 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
14 chr22:28317000-28348200 Weak transcription Brain Inferior Temporal Lobe brain
15 chr22:28317200-28336600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
16 chr22:28317600-28340800 Weak transcription Thymus Thymus
17 chr22:28317800-28342600 Weak transcription Small Intestine intestine
18 chr22:28317800-28345200 Weak transcription HepG2 liver
19 chr22:28318800-28382000 Weak transcription Primary T helper cells fromperipheralblood blood
20 chr22:28319600-28340800 Weak transcription Fetal Thymus thymus
21 chr22:28319600-28358000 Weak transcription Brain Germinal Matrix brain
22 chr22:28319600-28383000 Weak transcription Primary hematopoietic stem cells short term culture blood
23 chr22:28320800-28347800 Weak transcription HUVEC blood vessel
24 chr22:28321000-28354800 Weak transcription Fetal Adrenal Gland Adrenal Gland
25 chr22:28321200-28358400 Weak transcription Fetal Muscle Trunk muscle
26 chr22:28321400-28340400 Weak transcription Cortex derived primary cultured neurospheres brain
27 chr22:28321400-28379000 Weak transcription Primary B cells from cord blood blood
28 chr22:28321600-28345000 Weak transcription Fetal Lung lung
29 chr22:28321800-28342800 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
30 chr22:28322000-28365200 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
31 chr22:28322000-28366200 Weak transcription Primary hematopoietic stem cells blood
32 chr22:28322200-28339600 Weak transcription Primary T helper naive cells fromperipheralblood blood
33 chr22:28323800-28346000 Weak transcription Dnd41 blood
34 chr22:28326800-28334600 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
35 chr22:28326800-28368600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
36 chr22:28327000-28339200 Weak transcription iPS-20b Cell Line embryonic stem cell
37 chr22:28327000-28348000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
38 chr22:28327000-28348400 Weak transcription Rectal Smooth Muscle rectum
39 chr22:28327200-28339200 Weak transcription HUES48 Cell Line embryonic stem cell
40 chr22:28327400-28347800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
41 chr22:28329400-28340800 Weak transcription Pancreas Pancrea
42 chr22:28329400-28347800 Weak transcription Duodenum Smooth Muscle Duodenum
43 chr22:28329400-28348200 Weak transcription Adipose Nuclei Adipose
44 chr22:28329400-28377800 Weak transcription Primary T cells from cord blood blood
45 chr22:28329800-28344000 Weak transcription Liver Liver
46 chr22:28332200-28337600 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
47 chr22:28332200-28345400 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
48 chr22:28332600-28343000 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
49 chr22:28333600-28343400 Weak transcription Fetal Heart heart
50 chr22:28334000-28335200 Strong transcription Fetal Stomach stomach

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Last update: Aug 31, 2015