The 2.0 version of rSNPBase

Variant report

Variant rs16988122
Chromosome Location chr22:30350437-30350438
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:81 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30313600-30354200 Weak transcription Small Intestine intestine
2 chr22:30328400-30351800 Weak transcription Monocytes-CD14+_RO01746 blood
3 chr22:30334200-30374800 Weak transcription Thymus Thymus
4 chr22:30340200-30351000 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
5 chr22:30340200-30355400 Weak transcription Fetal Intestine Small intestine
6 chr22:30340200-30374800 Weak transcription Fetal Thymus thymus
7 chr22:30340600-30360400 Weak transcription Primary hematopoietic stem cells blood
8 chr22:30340600-30370000 Weak transcription Primary hematopoietic stem cells short term culture blood
9 chr22:30340600-30375000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
10 chr22:30340800-30376000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
11 chr22:30341200-30352200 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
12 chr22:30341200-30353600 Weak transcription Primary T regulatory cells fromperipheralblood blood
13 chr22:30341400-30351000 Weak transcription Primary T killer naive cells fromperipheralblood blood
14 chr22:30341400-30354400 Weak transcription Rectal Mucosa Donor 29 rectum
15 chr22:30341400-30355200 Weak transcription Primary mononuclear cells fromperipheralblood Blood
16 chr22:30342600-30352200 Weak transcription Gastric stomach
17 chr22:30342600-30375200 Weak transcription Spleen Spleen
18 chr22:30344200-30375000 Weak transcription HMEC breast
19 chr22:30344400-30376000 Weak transcription HSMMtube muscle
20 chr22:30344600-30357600 Weak transcription H9 Derived Neuron Cultured Cells ES cell derived
21 chr22:30344600-30357800 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
22 chr22:30344600-30358400 Weak transcription Fetal Stomach stomach
23 chr22:30344600-30367200 Weak transcription Brain Anterior Caudate brain
24 chr22:30344600-30370000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
25 chr22:30344600-30374600 Weak transcription Adipose Nuclei Adipose
26 chr22:30344600-30375600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
27 chr22:30345000-30352800 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
28 chr22:30345000-30358600 Weak transcription Fetal Lung lung
29 chr22:30345000-30367200 Weak transcription Brain Cingulate Gyrus brain
30 chr22:30345000-30367600 Weak transcription Brain Germinal Matrix brain
31 chr22:30345000-30375400 Weak transcription Fetal Brain Female brain
32 chr22:30345400-30352200 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
33 chr22:30345400-30356400 Weak transcription Fetal Brain Male brain
34 chr22:30345400-30370000 Weak transcription HSMM muscle
35 chr22:30345400-30371600 Weak transcription Lung lung
36 chr22:30345400-30379000 Weak transcription Esophagus oesophagus
37 chr22:30345800-30363200 Weak transcription Liver Liver
38 chr22:30346200-30351000 Weak transcription Fetal Adrenal Gland Adrenal Gland
39 chr22:30346200-30355200 Weak transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
40 chr22:30347000-30373800 Weak transcription Left Ventricle heart
41 chr22:30347200-30352200 Weak transcription Psoas Muscle Psoas
42 chr22:30347200-30357800 Weak transcription Fetal Muscle Trunk muscle
43 chr22:30347200-30369600 Weak transcription Pancreas Pancrea
44 chr22:30347600-30359600 Weak transcription Skeletal Muscle Male skeletal muscle
45 chr22:30347600-30360000 Weak transcription Skeletal Muscle Female skeletal muscle
46 chr22:30347800-30352200 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
47 chr22:30347800-30353800 Weak transcription Primary B cells from cord blood blood
48 chr22:30348000-30374800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
49 chr22:30348200-30352000 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
50 chr22:30348200-30354200 Weak transcription Primary T cells fromperipheralblood blood

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Last update: Aug 31, 2015