The 2.0 version of rSNPBase

Variant report

Variant rs6006318
Chromosome Location chr22:30367479-30367480
allele G/T
Outlinks Ensembl   UCSC
Chromatin state (count:99 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr22:30334200-30374800 Weak transcription Thymus Thymus
2 chr22:30340200-30374800 Weak transcription Fetal Thymus thymus
3 chr22:30340600-30370000 Weak transcription Primary hematopoietic stem cells short term culture blood
4 chr22:30340600-30375000 Weak transcription Primary T helper 17 cells PMA-I stimulated --
5 chr22:30340800-30376000 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
6 chr22:30342600-30375200 Weak transcription Spleen Spleen
7 chr22:30344200-30375000 Weak transcription HMEC breast
8 chr22:30344400-30376000 Weak transcription HSMMtube muscle
9 chr22:30344600-30370000 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
10 chr22:30344600-30374600 Weak transcription Adipose Nuclei Adipose
11 chr22:30344600-30375600 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
12 chr22:30345000-30367600 Weak transcription Brain Germinal Matrix brain
13 chr22:30345000-30375400 Weak transcription Fetal Brain Female brain
14 chr22:30345400-30370000 Weak transcription HSMM muscle
15 chr22:30345400-30371600 Weak transcription Lung lung
16 chr22:30345400-30379000 Weak transcription Esophagus oesophagus
17 chr22:30347000-30373800 Weak transcription Left Ventricle heart
18 chr22:30347200-30369600 Weak transcription Pancreas Pancrea
19 chr22:30348000-30374800 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
20 chr22:30348400-30373800 Weak transcription Primary T helper cells fromperipheralblood blood
21 chr22:30348400-30387200 Weak transcription Primary T helper naive cells from peripheral blood blood
22 chr22:30349400-30370400 Weak transcription HUES64 Cell Line embryonic stem cell
23 chr22:30349800-30367600 Weak transcription Primary T helper naive cells fromperipheralblood blood
24 chr22:30350000-30367800 Weak transcription Brain Substantia Nigra brain
25 chr22:30350600-30375400 Weak transcription GM12878-XiMat blood
26 chr22:30350600-30402600 Weak transcription Aorta Aorta
27 chr22:30350800-30367600 Weak transcription Brain Inferior Temporal Lobe brain
28 chr22:30351200-30385800 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
29 chr22:30351200-30387400 Weak transcription Ovary ovary
30 chr22:30352000-30369600 Weak transcription Fetal Muscle Leg muscle
31 chr22:30352600-30371600 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
32 chr22:30352800-30373800 Weak transcription Mesenchymal Stem Cell Derived Adipocyte Cultured Cells ES cell derived
33 chr22:30352800-30388600 Weak transcription HepG2 liver
34 chr22:30353000-30369800 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr22:30353200-30369200 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
36 chr22:30353600-30375000 Weak transcription Psoas Muscle Psoas
37 chr22:30354600-30367600 Weak transcription Brain Hippocampus Middle brain
38 chr22:30354600-30390200 Weak transcription Colonic Mucosa Colon
39 chr22:30354800-30368000 Weak transcription Dnd41 blood
40 chr22:30354800-30390400 Weak transcription Small Intestine intestine
41 chr22:30355000-30374400 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
42 chr22:30355200-30374000 Weak transcription Placenta Placenta
43 chr22:30356000-30369800 Weak transcription Primary T cells fromperipheralblood blood
44 chr22:30356200-30376600 Weak transcription Fetal Kidney kidney
45 chr22:30357200-30367600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
46 chr22:30358800-30367800 Weak transcription Breast Myoepithelial Primary Cells Breast
47 chr22:30358800-30369600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
48 chr22:30358800-30374800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
49 chr22:30358800-30387400 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
50 chr22:30359000-30372800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --

Quick Search:


  
Input of quick search could be:

what's new

Quick links

Copyright © 2015, Bioinformatics Lab, Institute of Psychology, Chinese Academy of Sciences. All Rights Reserved Feedback
Last update: Aug 31, 2015