Variant report

Variant rs17005804
Chromosome Location chr3:69442315-69442316
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:20 , 50 per page) page: 1
No. Chromosome Location Chromatin state Cell line Tissue
1 chr3:69438800-69442400 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
2 chr3:69439000-69449600 Weak transcription Fetal Lung lung
3 chr3:69439800-69443600 Weak transcription Breast variant Human Mammary Epithelial Cells (vHMEC) Breast
4 chr3:69440000-69453800 Weak transcription HMEC breast
5 chr3:69440600-69442400 Enhancers Brain Hippocampus Middle brain
6 chr3:69440600-69442800 Enhancers iPS-15b Cell Line embryonic stem cell
7 chr3:69440800-69442400 Enhancers iPS-18 Cell Line embryonic stem cell
8 chr3:69440800-69442400 Enhancers ES-UCSF4 Cell Line embryonic stem cell
9 chr3:69440800-69442600 Enhancers iPS-20b Cell Line embryonic stem cell
10 chr3:69441000-69442400 Enhancers Brain Anterior Caudate brain
11 chr3:69441200-69442600 Enhancers HUES6 Cell Line embryonic stem cell
12 chr3:69441200-69442600 Enhancers HUES64 Cell Line embryonic stem cell
13 chr3:69441400-69442400 Enhancers Spleen Spleen
14 chr3:69441400-69443800 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
15 chr3:69441600-69442400 Enhancers Brain Cingulate Gyrus brain
16 chr3:69441600-69442400 Enhancers Brain Substantia Nigra brain
17 chr3:69441800-69446200 Weak transcription NHEK skin
18 chr3:69441800-69450000 Strong transcription Foreskin Keratinocyte Primary Cells skin03 Skin
19 chr3:69442200-69442800 Enhancers HUES48 Cell Line embryonic stem cell
20 chr3:69442200-69444600 Weak transcription Left Ventricle heart

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