Variant report

rSNPs within LD-proxies of this variant (count:20)

rs_ID	r²[population]
rs10021127	0.94[ASN][1000 genomes]
rs1155057	0.90[EUR][1000 genomes]
rs11727935	0.82[EUR][1000 genomes]
rs11932874	1.00[CHB][hapmap];1.00[CHD][hapmap];1.00[JPT][hapmap]
rs17008673	0.94[ASN][1000 genomes]
rs17008681	0.94[ASN][1000 genomes]
rs17008689	1.00[AFR][1000 genomes];1.00[AMR][1000 genomes];1.00[EUR][1000 genomes];1.00[ASN][1000 genomes]
rs28372645	0.94[ASN][1000 genomes]
rs28451675	0.94[ASN][1000 genomes]
rs28532917	0.94[ASN][1000 genomes]
rs28718327	0.94[ASN][1000 genomes]
rs60920285	0.90[EUR][1000 genomes]
rs6816368	0.94[ASN][1000 genomes]
rs6857631	0.88[ASN][1000 genomes]
rs72961914	0.88[ASN][1000 genomes]
rs72961932	0.94[ASN][1000 genomes]
rs72961933	1.00[EUR][1000 genomes];0.94[ASN][1000 genomes]
rs72962002	0.94[ASN][1000 genomes]
rs73831427	0.90[EUR][1000 genomes]
rs7699309	0.94[ASN][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:1 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv829997	chr4:85244076-85409405	Weak transcription Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Bivalent TSS/Enh Flanking Active TSS Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	5 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:5 , 50 per page) page: 1

No.	Chromosome Location	Chromatin state	Cell line	Tissue
1	chr4:85286400-85289400	Enhancers	H9 Derived Neuronal Progenitor Cultured Cells	ES cell derived
2	chr4:85286800-85288800	Enhancers	H9 Derived Neuron Cultured Cells	ES cell derived
3	chr4:85287000-85288400	Bivalent Enhancer	hESC Derived CD56+ Ectoderm Cultured Cells	ES cell derived
4	chr4:85287000-85288400	Enhancers	Fetal Brain Male	brain
5	chr4:85287400-85289200	Enhancers	iPS-18 Cell Line	embryonic stem cell

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