Variant report

rSNPs within LD-proxies of this variant (count:21)

rs_ID	r²[population]
rs11123020	1.00[CEU][hapmap]
rs13426564	0.93[JPT][hapmap]
rs1439140	0.91[EUR][1000 genomes]
rs17010758	0.94[JPT][hapmap]
rs17010759	0.94[JPT][hapmap]
rs17010772	0.87[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap];0.84[EUR][1000 genomes]
rs17010799	0.85[CEU][hapmap];1.00[CHB][hapmap];1.00[JPT][hapmap]
rs17010805	0.87[CEU][hapmap]
rs17010807	0.85[CEU][hapmap];0.88[EUR][1000 genomes]
rs17010955	1.00[CEU][hapmap]
rs17010963	1.00[CEU][hapmap]
rs17010972	1.00[CEU][hapmap]
rs1881793	1.00[CEU][hapmap]
rs1919837	1.00[CEU][hapmap]
rs61605355	0.84[EUR][1000 genomes]
rs7423056	0.89[AMR][1000 genomes]
rs7584999	1.00[CEU][hapmap];0.90[CHB][hapmap];1.00[JPT][hapmap];0.91[EUR][1000 genomes];0.81[ASN][1000 genomes]
rs951031	0.86[EUR][1000 genomes]
rs960536	1.00[CEU][hapmap];0.89[AMR][1000 genomes]
rs960537	1.00[AFR][1000 genomes]
rs981455	0.89[AMR][1000 genomes]

Variant overlapped rSNPs/rCNVs (count:2 , 50 per page) page: 1

No.	Variant name	Chromosome position	Chromatin state	Related regulatory elements	Target genes	Extended variants	Associated traits
1	nsv531408	chr2:124727329-125011247	Bivalent Enhancer Enhancers Bivalent/Poised TSS Flanking Active TSS Flanking Bivalent TSS/Enh Weak transcription Active TSS ZNF genes & repeats	TF binding region CpG island Chromatin interactive region lncRNA	2 gene(s)	inside rSNPs	diseases
2	nsv874989	chr2:124892592-125176030	Enhancers ZNF genes & repeats Weak transcription Active TSS Flanking Active TSS Bivalent Enhancer	TF binding region CpG island Chromatin interactive region lncRNA	1 gene(s)	inside rSNPs	diseases

No data

Chromatin state (count:0 , 50 per page) page:

No data

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