Variant report
Variant | rs17018472 |
---|---|
Chromosome Location | chr1:212261331-212261332 |
allele | A/G |
Outlinks | Ensembl   UCSC |
No. | Chromosome Location | Chromatin state | Cell line | Tissue |
---|---|---|---|---|
1 | chr1:212214400-212278000 | Weak transcription | H1 BMP4 Derived Mesendoderm Cultured Cells | ES cell derived |
2 | chr1:212229600-212266600 | Weak transcription | iPS DF 19.11 Cell Line | embryonic stem cell |
3 | chr1:212229800-212261400 | Weak transcription | Fetal Intestine Small | intestine |
4 | chr1:212229800-212263000 | Weak transcription | Duodenum Mucosa | Duodenum |
5 | chr1:212229800-212266400 | Weak transcription | H1 BMP4 Derived Trophoblast Cultured Cells | ES cell derived |
6 | chr1:212230000-212265200 | Strong transcription | HUES64 Cell Line | embryonic stem cell |
7 | chr1:212230800-212261800 | Weak transcription | Primary B cells from cord blood | blood |
8 | chr1:212231400-212261800 | Weak transcription | Adipose Derived Mesenchymal Stem Cell Cultured Cells | ES cell derived |
9 | chr1:212233000-212266400 | Strong transcription | H9 Derived Neuronal Progenitor Cultured Cells | ES cell derived |
10 | chr1:212234000-212265400 | Strong transcription | HUES48 Cell Line | embryonic stem cell |
11 | chr1:212234000-212265800 | Strong transcription | HUES6 Cell Line | embryonic stem cell |
12 | chr1:212234200-212267400 | Strong transcription | Dnd41 | blood |
13 | chr1:212236000-212265200 | Strong transcription | K562 | blood |
14 | chr1:212237000-212266200 | Strong transcription | iPS-20b Cell Line | embryonic stem cell |
15 | chr1:212237200-212267000 | Strong transcription | iPS-18 Cell Line | embryonic stem cell |
16 | chr1:212237600-212266800 | Strong transcription | H9 Derived Neuron Cultured Cells | ES cell derived |
17 | chr1:212237800-212262000 | Strong transcription | Hela-S3 | cervix |
18 | chr1:212241600-212264200 | Weak transcription | Fetal Brain Female | brain |
19 | chr1:212241600-212284600 | Weak transcription | ES-WA7 Cell Line | embryonic stem cell |
20 | chr1:212244600-212267200 | Strong transcription | ES-UCSF4 Cell Line | embryonic stem cell |
21 | chr1:212247200-212261400 | Weak transcription | Fetal Kidney | kidney |
22 | chr1:212248200-212261600 | Weak transcription | Psoas Muscle | Psoas |
23 | chr1:212249400-212266000 | Strong transcription | A549 | lung |
24 | chr1:212253000-212270800 | Weak transcription | Placenta Amnion | Placenta Amnion |
25 | chr1:212253600-212261800 | Weak transcription | Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells | embryonic stem cell |
26 | chr1:212254800-212278000 | Weak transcription | NHDF-Ad | bronchial |
27 | chr1:212255800-212261400 | Weak transcription | HUVEC | blood vessel |
28 | chr1:212256000-212261600 | Weak transcription | Primary monocytes fromperipheralblood | blood |
29 | chr1:212256000-212266600 | Weak transcription | Fetal Muscle Trunk | muscle |
30 | chr1:212256000-212266800 | Weak transcription | iPS DF 6.9 Cell Line | embryonic stem cell |
31 | chr1:212256000-212271000 | Weak transcription | iPS-15b Cell Line | embryonic stem cell |
32 | chr1:212256400-212264800 | Weak transcription | HepG2 | liver |
33 | chr1:212256400-212265800 | Weak transcription | Ganglion Eminence derived primary cultured neurospheres | brain |
34 | chr1:212256400-212271200 | Weak transcription | ES-I3 Cell Line | embryonic stem cell |
35 | chr1:212256400-212278600 | Weak transcription | NHLF | lung |
36 | chr1:212256800-212261600 | Weak transcription | Foreskin Melanocyte Primary Cells skin01 | Skin |
37 | chr1:212257200-212261600 | Weak transcription | HMEC | breast |
38 | chr1:212257200-212262800 | Weak transcription | Primary hematopoietic stem cells | blood |
39 | chr1:212258400-212261400 | Weak transcription | Foreskin Melanocyte Primary Cells skin03 | Skin |
40 | chr1:212259400-212264600 | Weak transcription | hESC Derived CD56+ Ectoderm Cultured Cells | ES cell derived |
41 | chr1:212259600-212261400 | Weak transcription | Breast variant Human Mammary Epithelial Cells (vHMEC) | Breast |
42 | chr1:212259600-212262400 | Weak transcription | Monocytes-CD14+_RO01746 | blood |
43 | chr1:212259800-212261600 | Strong transcription | GM12878-XiMat | blood |
44 | chr1:212260000-212261400 | Weak transcription | Primary hematopoietic stem cells G-CSF-mobilized Male | -- |
45 | chr1:212261000-212261400 | Flanking Active TSS | Brain Angular Gyrus | brain |
46 | chr1:212261000-212261400 | Enhancers | Left Ventricle | heart |
47 | chr1:212261000-212261400 | Enhancers | Right Ventricle | heart |
48 | chr1:212261000-212261400 | Genic enhancers | NHEK | skin |
49 | chr1:212261000-212261600 | Active TSS | Brain Anterior Caudate | brain |
50 | chr1:212261000-212261600 | Active TSS | Brain Inferior Temporal Lobe | brain |