The 2.0 version of rSNPBase

Variant report

Variant rs17018392
Chromosome Location chr1:212215278-212215279
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:73 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212209400-212217800 Weak transcription Small Intestine intestine
2 chr1:212209600-212226600 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
3 chr1:212209600-212253000 Weak transcription Sigmoid Colon Sigmoid Colon
4 chr1:212210400-212223600 Weak transcription HSMM muscle
5 chr1:212210400-212227400 Weak transcription Fetal Muscle Trunk muscle
6 chr1:212210400-212228800 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
7 chr1:212210400-212228800 Weak transcription Duodenum Mucosa Duodenum
8 chr1:212210400-212228800 Weak transcription Fetal Intestine Large intestine
9 chr1:212210600-212215600 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
10 chr1:212210600-212227400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
11 chr1:212210600-212229200 Weak transcription Fetal Brain Female brain
12 chr1:212210800-212216800 Weak transcription Fetal Intestine Small intestine
13 chr1:212210800-212217400 Weak transcription Fetal Muscle Leg muscle
14 chr1:212210800-212220800 Weak transcription Fetal Stomach stomach
15 chr1:212210800-212241200 Weak transcription ES-WA7 Cell Line embryonic stem cell
16 chr1:212211000-212218200 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:212211000-212227200 Weak transcription iPS-15b Cell Line embryonic stem cell
18 chr1:212211400-212224000 Weak transcription Placenta Amnion Placenta Amnion
19 chr1:212211400-212226600 Weak transcription Fetal Adrenal Gland Adrenal Gland
20 chr1:212211400-212229200 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
21 chr1:212211600-212218200 Weak transcription H9 Cell Line embryonic stem cell
22 chr1:212211600-212218200 Weak transcription Primary neutrophils fromperipheralblood blood
23 chr1:212211600-212227400 Weak transcription Fetal Lung lung
24 chr1:212211800-212218200 Weak transcription Cortex derived primary cultured neurospheres brain
25 chr1:212211800-212223600 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
26 chr1:212212000-212219200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
27 chr1:212212000-212220600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
28 chr1:212212000-212223000 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
29 chr1:212212000-212228400 Weak transcription Brain Germinal Matrix brain
30 chr1:212212000-212229200 Weak transcription Fetal Kidney kidney
31 chr1:212213000-212227000 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
32 chr1:212213200-212216200 Weak transcription hESC Derived CD184+ Endoderm Cultured Cells ES cell derived
33 chr1:212214200-212215800 Weak transcription hESC Derived CD56+ Mesoderm Cultured Cells ES cell derived
34 chr1:212214200-212216600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
35 chr1:212214200-212216800 Weak transcription H1 Cell Line embryonic stem cell
36 chr1:212214200-212222600 Weak transcription Primary hematopoietic stem cells blood
37 chr1:212214400-212215600 Weak transcription HUES64 Cell Line embryonic stem cell
38 chr1:212214400-212215600 Weak transcription Bone Marrow Derived Cultured Mesenchymal Stem Cells Bone marrow
39 chr1:212214400-212216200 Weak transcription iPS-18 Cell Line embryonic stem cell
40 chr1:212214400-212219000 Weak transcription NHDF-Ad bronchial
41 chr1:212214400-212227200 Weak transcription NHEK skin
42 chr1:212214400-212228000 Weak transcription NH-A brain
43 chr1:212214400-212228200 Strong transcription Primary hematopoietic stem cells short term culture blood
44 chr1:212214400-212278000 Weak transcription H1 BMP4 Derived Mesendoderm Cultured Cells ES cell derived
45 chr1:212214600-212215600 Weak transcription HUES6 Cell Line embryonic stem cell
46 chr1:212214600-212215600 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
47 chr1:212214600-212215600 Weak transcription Muscle Satellite Cultured Cells --
48 chr1:212214600-212215600 Weak transcription Osteobl bone
49 chr1:212214600-212216000 Weak transcription Fetal Thymus thymus
50 chr1:212214600-212216200 Weak transcription HUES48 Cell Line embryonic stem cell

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Last update: Aug 31, 2015