The 2.0 version of rSNPBase

Variant report

Variant rs1933594
Chromosome Location chr1:212158256-212158257
allele C/T
Outlinks Ensembl   UCSC
Chromatin state (count:119 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212112000-212170200 Weak transcription Small Intestine intestine
2 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
3 chr1:212113600-212170200 Weak transcription Fetal Brain Male brain
4 chr1:212114200-212185800 Weak transcription Brain Angular Gyrus brain
5 chr1:212123600-212159200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
6 chr1:212123800-212198200 Weak transcription Primary T killer memory cells from peripheral blood blood
7 chr1:212125400-212170400 Weak transcription Brain Anterior Caudate brain
8 chr1:212125600-212159200 Weak transcription Muscle Satellite Cultured Cells --
9 chr1:212125600-212160000 Weak transcription ES-I3 Cell Line embryonic stem cell
10 chr1:212129000-212167800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
11 chr1:212129400-212204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
12 chr1:212133200-212170600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
13 chr1:212133400-212159400 Weak transcription Rectal Mucosa Donor 31 rectum
14 chr1:212133400-212188200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
15 chr1:212133600-212158400 Weak transcription Brain Inferior Temporal Lobe brain
16 chr1:212133600-212159000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
17 chr1:212133600-212159000 Weak transcription Skeletal Muscle Male skeletal muscle
18 chr1:212133600-212159000 Weak transcription Skeletal Muscle Female skeletal muscle
19 chr1:212133600-212159800 Weak transcription Brain Substantia Nigra brain
20 chr1:212133600-212170000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
21 chr1:212133600-212170200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
22 chr1:212133600-212174400 Weak transcription Spleen Spleen
23 chr1:212133800-212158400 Weak transcription Fetal Intestine Small intestine
24 chr1:212133800-212159200 Weak transcription Thymus Thymus
25 chr1:212133800-212160000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
26 chr1:212133800-212170000 Weak transcription Pancreas Pancrea
27 chr1:212133800-212208000 Weak transcription Gastric stomach
28 chr1:212134000-212159000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
29 chr1:212134000-212159000 Weak transcription Brain Cingulate Gyrus brain
30 chr1:212134000-212207600 Weak transcription Primary T helper naive cells fromperipheralblood blood
31 chr1:212134000-212207800 Weak transcription Colonic Mucosa Colon
32 chr1:212136600-212204000 Weak transcription Primary T helper memory cells from peripheral blood 2 blood
33 chr1:212137200-212162600 Strong transcription Dnd41 blood
34 chr1:212139000-212159400 Weak transcription Ovary ovary
35 chr1:212140400-212159400 Weak transcription Sigmoid Colon Sigmoid Colon
36 chr1:212146000-212185600 Weak transcription Primary T helper naive cells from peripheral blood blood
37 chr1:212147000-212161200 Strong transcription HUES64 Cell Line embryonic stem cell
38 chr1:212147800-212162400 Strong transcription Hela-S3 cervix
39 chr1:212148600-212159400 Weak transcription Brain Hippocampus Middle brain
40 chr1:212148600-212159800 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
41 chr1:212148800-212160800 Weak transcription Colon Smooth Muscle Colon
42 chr1:212148800-212207600 Weak transcription Rectal Smooth Muscle rectum
43 chr1:212149200-212180600 Weak transcription HSMMtube muscle
44 chr1:212149200-212199800 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
45 chr1:212149400-212159200 Weak transcription Aorta Aorta
46 chr1:212149400-212161400 Strong transcription iPS-20b Cell Line embryonic stem cell
47 chr1:212149800-212172400 Weak transcription Fetal Heart heart
48 chr1:212150000-212159200 Weak transcription H1 Cell Line embryonic stem cell
49 chr1:212150400-212161600 Strong transcription Monocytes-CD14+_RO01746 blood
50 chr1:212150800-212158800 Weak transcription Osteobl bone

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Last update: Aug 31, 2015