The 2.0 version of rSNPBase

Variant report

Variant rs17018514
Chromosome Location chr1:212278001-212278002
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:80 , 50 per page) page: 1 2
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212241600-212284600 Weak transcription ES-WA7 Cell Line embryonic stem cell
2 chr1:212256400-212278600 Weak transcription NHLF lung
3 chr1:212262000-212283000 Weak transcription NH-A brain
4 chr1:212262000-212284400 Weak transcription Osteobl bone
5 chr1:212262200-212279600 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
6 chr1:212262200-212289200 Weak transcription Muscle Satellite Cultured Cells --
7 chr1:212263400-212278200 Weak transcription Duodenum Mucosa Duodenum
8 chr1:212264400-212282400 Weak transcription Primary monocytes fromperipheralblood blood
9 chr1:212267200-212287000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
10 chr1:212268600-212282800 Weak transcription Primary neutrophils fromperipheralblood blood
11 chr1:212269800-212279600 Strong transcription Dnd41 blood
12 chr1:212270200-212278800 Weak transcription Primary T cells from cord blood blood
13 chr1:212270400-212280400 Strong transcription Primary hematopoietic stem cells short term culture blood
14 chr1:212270600-212280200 Weak transcription Primary hematopoietic stem cells blood
15 chr1:212270800-212279800 Strong transcription Fetal Thymus thymus
16 chr1:212271400-212280000 Strong transcription GM12878-XiMat blood
17 chr1:212271600-212280400 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Female --
18 chr1:212271600-212287000 Weak transcription Primary B cells from cord blood blood
19 chr1:212271800-212278600 Weak transcription ES-I3 Cell Line embryonic stem cell
20 chr1:212271800-212280200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
21 chr1:212272000-212281000 Weak transcription Esophagus oesophagus
22 chr1:212272000-212285400 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
23 chr1:212272000-212285800 Weak transcription Lung lung
24 chr1:212272000-212291000 Weak transcription Left Ventricle heart
25 chr1:212272200-212278200 Weak transcription iPS-15b Cell Line embryonic stem cell
26 chr1:212272200-212279600 Weak transcription H9 Cell Line embryonic stem cell
27 chr1:212272200-212280200 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
28 chr1:212272200-212280200 Weak transcription iPS DF 19.11 Cell Line embryonic stem cell
29 chr1:212272200-212282800 Weak transcription Placenta Placenta
30 chr1:212272600-212281600 Strong transcription H9 Derived Neuron Cultured Cells ES cell derived
31 chr1:212274200-212287000 Weak transcription HMEC breast
32 chr1:212274200-212301600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
33 chr1:212274400-212279800 Weak transcription Thymus Thymus
34 chr1:212274400-212280600 Weak transcription HUVEC blood vessel
35 chr1:212274400-212282200 Weak transcription NHEK skin
36 chr1:212274400-212284200 Weak transcription Fetal Muscle Trunk muscle
37 chr1:212274400-212308200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
38 chr1:212274600-212282400 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
39 chr1:212274600-212283600 Weak transcription Fetal Muscle Leg muscle
40 chr1:212274800-212279800 Weak transcription Primary hematopoietic stem cells G-CSF-mobilized Male --
41 chr1:212275400-212278200 Weak transcription Cortex derived primary cultured neurospheres brain
42 chr1:212275400-212282600 Weak transcription Monocytes-CD14+_RO01746 blood
43 chr1:212275400-212286600 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
44 chr1:212275600-212280800 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
45 chr1:212275600-212280800 Weak transcription Foreskin Melanocyte Primary Cells skin03 Skin
46 chr1:212276600-212282000 Strong transcription K562 blood
47 chr1:212276800-212280600 Weak transcription Foreskin Keratinocyte Primary Cells skin03 Skin
48 chr1:212276800-212283000 Enhancers Fetal Intestine Small intestine
49 chr1:212277000-212278200 Enhancers ES-UCSF4 Cell Line embryonic stem cell
50 chr1:212277000-212280200 Enhancers Fetal Intestine Large intestine

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Last update: Aug 31, 2015