The 2.0 version of rSNPBase

Variant report

Variant rs41502452
Chromosome Location chr1:212148412-212148413
allele A/C
Outlinks Ensembl   UCSC
Chromatin state (count:118 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212106200-212148600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
2 chr1:212112000-212170200 Weak transcription Small Intestine intestine
3 chr1:212112400-212148600 Weak transcription NHDF-Ad bronchial
4 chr1:212112800-212202000 Weak transcription Primary T killer naive cells fromperipheralblood blood
5 chr1:212113600-212151600 Weak transcription Psoas Muscle Psoas
6 chr1:212113600-212170200 Weak transcription Fetal Brain Male brain
7 chr1:212114200-212185800 Weak transcription Brain Angular Gyrus brain
8 chr1:212115800-212151600 Weak transcription Adipose Derived Mesenchymal Stem Cell Cultured Cells ES cell derived
9 chr1:212118600-212149000 Weak transcription Fetal Heart heart
10 chr1:212123400-212152600 Weak transcription Primary T cells effector/memory enriched fromperipheralblood blood
11 chr1:212123600-212159200 Weak transcription Primary T helper 17 cells PMA-I stimulated --
12 chr1:212123800-212198200 Weak transcription Primary T killer memory cells from peripheral blood blood
13 chr1:212125400-212149000 Weak transcription Aorta Aorta
14 chr1:212125400-212170400 Weak transcription Brain Anterior Caudate brain
15 chr1:212125600-212159200 Weak transcription Muscle Satellite Cultured Cells --
16 chr1:212125600-212160000 Weak transcription ES-I3 Cell Line embryonic stem cell
17 chr1:212126000-212157000 Weak transcription HUVEC blood vessel
18 chr1:212126600-212148800 Weak transcription NHEK skin
19 chr1:212129000-212167800 Strong transcription H9 Derived Neuronal Progenitor Cultured Cells ES cell derived
20 chr1:212129400-212204000 Weak transcription Primary T helper memory cells from peripheral blood 1 blood
21 chr1:212130000-212157600 Strong transcription Primary hematopoietic stem cells short term culture blood
22 chr1:212133200-212152600 Weak transcription H9 Cell Line embryonic stem cell
23 chr1:212133200-212170600 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
24 chr1:212133400-212152600 Weak transcription NHLF lung
25 chr1:212133400-212157000 Weak transcription Esophagus oesophagus
26 chr1:212133400-212159400 Weak transcription Rectal Mucosa Donor 31 rectum
27 chr1:212133400-212188200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
28 chr1:212133600-212149000 Weak transcription H1 Cell Line embryonic stem cell
29 chr1:212133600-212151000 Weak transcription Placenta Placenta
30 chr1:212133600-212151000 Weak transcription Right Ventricle heart
31 chr1:212133600-212151600 Weak transcription Lung lung
32 chr1:212133600-212158400 Weak transcription Brain Inferior Temporal Lobe brain
33 chr1:212133600-212159000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
34 chr1:212133600-212159000 Weak transcription Skeletal Muscle Male skeletal muscle
35 chr1:212133600-212159000 Weak transcription Skeletal Muscle Female skeletal muscle
36 chr1:212133600-212159800 Weak transcription Brain Substantia Nigra brain
37 chr1:212133600-212170000 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
38 chr1:212133600-212170200 Weak transcription Foreskin Fibroblast Primary Cells skin02 Skin
39 chr1:212133600-212174400 Weak transcription Spleen Spleen
40 chr1:212133800-212158400 Weak transcription Fetal Intestine Small intestine
41 chr1:212133800-212159200 Weak transcription Thymus Thymus
42 chr1:212133800-212160000 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
43 chr1:212133800-212170000 Weak transcription Pancreas Pancrea
44 chr1:212133800-212208000 Weak transcription Gastric stomach
45 chr1:212134000-212151200 Weak transcription HepG2 liver
46 chr1:212134000-212159000 Weak transcription Foreskin Fibroblast Primary Cells skin01 Skin
47 chr1:212134000-212159000 Weak transcription Brain Cingulate Gyrus brain
48 chr1:212134000-212207600 Weak transcription Primary T helper naive cells fromperipheralblood blood
49 chr1:212134000-212207800 Weak transcription Colonic Mucosa Colon
50 chr1:212134400-212151000 Weak transcription Primary neutrophils fromperipheralblood blood

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Last update: Aug 31, 2015