The 2.0 version of rSNPBase

Variant report

Variant rs1052351
Chromosome Location chr1:212113970-212113971
allele A/G
Outlinks Ensembl   UCSC
Chromatin state (count:115 , 50 per page) page: 1 2 3
No. Chromosome Location Chromatin state Cell line Tissue
1 chr1:212102600-212115200 Weak transcription Ganglion Eminence derived primary cultured neurospheres brain
2 chr1:212102600-212120400 Weak transcription Placenta Amnion Placenta Amnion
3 chr1:212102800-212114400 Weak transcription HUES64 Cell Line embryonic stem cell
4 chr1:212102800-212115000 Weak transcription Fetal Thymus thymus
5 chr1:212102800-212115200 Weak transcription Mesenchymal Stem Cell Derived Chondrocyte Cultured Cells embryonic stem cell
6 chr1:212103000-212132600 Weak transcription Gastric stomach
7 chr1:212103200-212115000 Weak transcription HUES6 Cell Line embryonic stem cell
8 chr1:212103200-212115000 Weak transcription Foreskin Keratinocyte Primary Cells skin02 Skin
9 chr1:212103200-212115200 Weak transcription HUES48 Cell Line embryonic stem cell
10 chr1:212103200-212115200 Weak transcription iPS-20b Cell Line embryonic stem cell
11 chr1:212103600-212115000 Weak transcription NHEK skin
12 chr1:212103600-212115400 Weak transcription HMEC breast
13 chr1:212103600-212132200 Weak transcription Esophagus oesophagus
14 chr1:212103800-212132200 Weak transcription NHLF lung
15 chr1:212104000-212117600 Weak transcription HepG2 liver
16 chr1:212104200-212115000 Weak transcription Lung lung
17 chr1:212104800-212114800 Weak transcription Hela-S3 cervix
18 chr1:212104800-212124400 Weak transcription Foreskin Melanocyte Primary Cells skin01 Skin
19 chr1:212106200-212148600 Weak transcription Brain Dorsolateral Prefrontal Cortex brain
20 chr1:212106400-212115000 Weak transcription IMR90 fetal lung fibroblasts Cell Line lung
21 chr1:212106400-212132400 Weak transcription H1 Derived Mesenchymal Stem Cells ES cell derived
22 chr1:212106400-212132600 Weak transcription Right Ventricle heart
23 chr1:212106400-212147800 Weak transcription NH-A brain
24 chr1:212107000-212115000 Weak transcription Placenta Placenta
25 chr1:212107000-212115200 Weak transcription HSMM muscle
26 chr1:212107000-212118000 Weak transcription HSMMtube muscle
27 chr1:212107000-212132800 Weak transcription Pancreas Pancrea
28 chr1:212107200-212116600 Weak transcription HUVEC blood vessel
29 chr1:212107400-212115000 Weak transcription Fetal Brain Female brain
30 chr1:212108000-212115000 Weak transcription Fetal Muscle Trunk muscle
31 chr1:212108000-212132400 Weak transcription Spleen Spleen
32 chr1:212108200-212115000 Weak transcription ES-UCSF4 Cell Line embryonic stem cell
33 chr1:212108400-212115200 Weak transcription Skeletal Muscle Female skeletal muscle
34 chr1:212108400-212117800 Weak transcription Brain Cingulate Gyrus brain
35 chr1:212108600-212115200 Weak transcription hESC Derived CD56+ Ectoderm Cultured Cells ES cell derived
36 chr1:212109000-212114400 Weak transcription H1 Cell Line embryonic stem cell
37 chr1:212109200-212114400 Weak transcription Fetal Muscle Leg muscle
38 chr1:212109200-212115200 Weak transcription iPS-18 Cell Line embryonic stem cell
39 chr1:212109200-212118000 Weak transcription ES-I3 Cell Line embryonic stem cell
40 chr1:212109200-212118000 Weak transcription iPS-15b Cell Line embryonic stem cell
41 chr1:212109200-212118400 Weak transcription iPS DF 6.9 Cell Line embryonic stem cell
42 chr1:212109200-212132800 Weak transcription H1 Derived Neuronal Progenitor Cultured Cells ES cell derived
43 chr1:212110200-212114800 Weak transcription Fetal Stomach stomach
44 chr1:212111200-212117000 Weak transcription Brain Germinal Matrix brain
45 chr1:212111200-212118200 Weak transcription H1 BMP4 Derived Trophoblast Cultured Cells ES cell derived
46 chr1:212111800-212114600 Enhancers Foreskin Melanocyte Primary Cells skin03 Skin
47 chr1:212112000-212115000 Weak transcription Thymus Thymus
48 chr1:212112000-212115200 Weak transcription Sigmoid Colon Sigmoid Colon
49 chr1:212112000-212132200 Weak transcription Breast Myoepithelial Primary Cells Breast
50 chr1:212112000-212170200 Weak transcription Small Intestine intestine

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Last update: Aug 31, 2015